Transcript Information: R_Transcript_106402.p1


Annotated TAIR IDAT5G08200.1
Annotated Gene Namepeptidoglycan-binding LysM domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2638385-2640508 | Forward length=409
E-Value9E-107
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.396043378409
Replicate 25.8414904045344
Replicate 39.0785232992625
Condition 2: 8 Hour
Replicate 17.647816085885
Replicate 29.8599164024125
Replicate 314.006754651952
Condition 3: 24 Hour
Replicate 111.93082895298
Replicate 28.8568362473972
Replicate 312.408777460288


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_106402.p1 GENE.R_Transcript_106402~~R_Transcript_106402.p1 ORF type:complete len:381 (+),score=58.35 R_Transcript_106402:517-1659(+)
ATGGAATTTGAGAGAAGGAATGGATTTGCAAATGGAAATGGAAATTTATATATGTACGATCGATTCAAGTTGGAGGAGAGAGAAAGTGATAATAGTCCAACAACGGAGTCTGTGAAGGTATATCCGGTATCGTCGACGACGTCATCAGCTCCGTCATCGTCGTCATCATCTCCGCATCGATATATCGAGCATCATGTCACTAAGATGGATACCCTTGCCGGTGTCGCCATTCGTTACGGTGTCGAGGTCGCTGATATAAAAAAGATGAATGGCCTGGTTACGGATCTTCAAATGTTTGCCCTCAAGACACTTCATATTCCACTGCCTGGGAGGCACCCTCCATCTCCTTGCTTATCAAATGGCCACAGTGCTTCTGGACAAACCAGCTCTGAGCAGACTCCACCTCGCAAGTTGCACACTGATTTCCTTGATTCGTTTCAATCTTTGAGATTGACACCAGAACGCAGGGTTTCCCCTGCCATGAGCTCTTTGCAAGGGTACTATGGGCTTAAGGGCAGAAGAAACTCTTCTGAAGGCTGCGAAATGGCAGTTTACTGCAAAGGAAGTAACAACTCCCATGAAGATGACGCATATACGACACCATCATTGCTGATGAATCCCCCTCTCAGTCACCATAGGAGATCCAGAAGTTTGGCTAATGGTTTCAAGACTGAAGAATGCGATCCAACTGATGATGCGGACACAGATCTTGATAAACGGTTGGGTAAACAAAGCAGGCGGCGCCAAAAATCAGAAGTGGACTTTGGTCGCACTCCCGAGAAATTGTTGAAAGAGGAAAACGGTAGCAGTAGTTGGTTTTCTGCAATCACAGGGAAGGGTTTAGCACTTAGAACAAAAGCAGCAAGCCGAACTAATTTAGCTTCCGAAGGTGAAGGAGGGGGAGTGAATGGACTGTCATCCTTACCGGTGGACTCTGCTGCGGCTGATAACTCATCGGGATTCAGAAAGTCATCAAGCACATCAAGTTTACAGGAACAGGAAAACGGTAGTAGTTCATTCATCTGGTCAGCATCCAAGTGGTCTTCTTTGAAGCCGGACTTACAGGCCGCCCTTTCAAAACCAATCTTTGATGGCCTTCCGAAACCAATTACTGGTCGAAAAACTAAAGCCGCTCTGGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_106402.p1 GENE.R_Transcript_106402~~R_Transcript_106402.p1 ORF type:complete len:381 (+),score=58.35 R_Transcript_106402:517-1659(+)
MEFERRNGFANGNGNLYMYDRFKLEERESDNSPTTESVKVYPVSSTTSSAPSSSSSSPHRYIEHHVTKMDTLAGVAIRYGVEVADIKKMNGLVTDLQMFALKTLHIPLPGRHPPSPCLSNGHSASGQTSSEQTPPRKLHTDFLDSFQSLRLTPERRVSPAMSSLQGYYGLKGRRNSSEGCEMAVYCKGSNNSHEDDAYTTPSLLMNPPLSHHRRSRSLANGFKTEECDPTDDADTDLDKRLGKQSRRRQKSEVDFGRTPEKLLKEENGSSSWFSAITGKGLALRTKAASRTNLASEGEGGGVNGLSSLPVDSAAADNSSGFRKSSSTSSLQEQENGSSSFIWSASKWSSLKPDLQAALSKPIFDGLPKPITGRKTKAALD*

Click here to download the sequence:
Link to NCBI Protein BLAST