Transcript Information: R_Transcript_106641.p2


Annotated TAIR IDAT5G06860.1
Annotated Gene Namepolygalacturonase inhibiting protein 1
Annotated Gene Symbol(s)PGIP1, ATPGIP1
Annotation TypeHomolog
Chromosome Positionchr5:2132373-2133434 | Forward length=330
E-Value3E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3420914424133
Replicate 22.0700577875223
Replicate 31.9357806419284
Condition 2: 8 Hour
Replicate 123.968557941317
Replicate 24.8816009653293
Replicate 33.8348473141663
Condition 3: 24 Hour
Replicate 11.4550722890798
Replicate 20
Replicate 31.5413876540069


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_106641.p2 GENE.R_Transcript_106641~~R_Transcript_106641.p2 ORF type:complete len:142 (+),score=11.76 R_Transcript_106641:781-1206(+)
ATGCTACTCTTTCTAGGTAACAACCGGTTGTCCGGTCCCATTCCAAAATCAGTTGGCCAGGCTAACATAAATCTTTTAGGTTTGTCCTCTAACAAGTTCACTGGGGATGCTTCCTTTTTGTTTGGGAGGGACAAAACTGCATTGGATACCATATACCTTGATGATAATCATTTCCATTTCGACTTCTCGAAGGTAGAATTCCCAATTGGCCTAAGGAACCTTGATATCCGAAACAACGAGATATATGGATCACTTCCAAAACAGCTAGGCCAGCTGCCATTGACGTACATTGATGTAAGTCACAACCAGCTTTGTGGCCCGATCCCGACCGGCCGGCGGCTGAAACGGTTCAGCCCGGACAAATTCTCCCACAACAAGTGCTTATGTGGTCTCCCCTTACCACCTTGCAAAAAATTAGAGAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_106641.p2 GENE.R_Transcript_106641~~R_Transcript_106641.p2 ORF type:complete len:142 (+),score=11.76 R_Transcript_106641:781-1206(+)
MLLFLGNNRLSGPIPKSVGQANINLLGLSSNKFTGDASFLFGRDKTALDTIYLDDNHFHFDFSKVEFPIGLRNLDIRNNEIYGSLPKQLGQLPLTYIDVSHNQLCGPIPTGRRLKRFSPDKFSHNKCLCGLPLPPCKKLES*

Click here to download the sequence:
Link to NCBI Protein BLAST