Transcript Information: R_Transcript_106727.p1


Annotated TAIR IDAT3G25430.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9221204-9223700 | Forward length=618
E-Value1.6E-214
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0333155658008
Replicate 22.0319000402869
Replicate 32.8079226730767
Condition 2: 8 Hour
Replicate 12.9225064614454
Replicate 22.3803519379327
Replicate 33.3668310021686
Condition 3: 24 Hour
Replicate 13.7028721335007
Replicate 23.9486028013775
Replicate 34.0951189414195


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_106727.p1 GENE.R_Transcript_106727~~R_Transcript_106727.p1 ORF type:complete len:620 (+),score=118.11,CAF1|PF04857.16|4.5e-57 R_Transcript_106727:105-1964(+)
ATGCTCCAAAAGCGCCTGTTTTGCACTCAAGTCACTGCCCAGATCAACAAGAACATAAACAATAGCAATAACAGCATCAAGAAATGGAGAATAAAGCAAGTAAGAAAGTCCACTTTCAACCAAGTATTGGAGGAGGTCAAGTCCCACATTTGCAATTCAGATTTCATTGCAATCTCTCTGCAAAAAACAGGCTCATACTCGGCCCCATGGCAAAGGGTTTTACCCTTTGACACCCCACAAATTGCCTACTTGAAATCCAAGAGGGCTGCTGAGCGCTTTCAGGTTTTTCAGTTGGCTCTTTGCCCTTTCACTCTTAGGGCTTCTAAGCTCACTGCTTACCCATATAATTTCCACCTATTTCCAAGGGATGAACTGAAAATCGGGATGCCTTCTTACAGTTTTGCATGTCAAACATCATATTTGACATCCATGGCTCGACTTGGGTTTGATTTTAATGCGTGCATATATGATGGGATCTCTTACTTATCTAGAGCTCAAGAATCAGCAATGAAACATCTAACAGGGAATTCACTGCTGCGAGCAAATGCAGTGCAATCTTCTCCAGGATCTTCAGTTGCTGATTCAGTTTTTCTTGAAAGGATCAAATCAAAATTTCGAACCTGGAGAAGTGCATTCAAGGAAACAGAAGCAAAGGCTGAGGATCCGTTGATCAAATCCCTGAGAAAAGTTGTCCTAGGTGAGCTACATGGATCCAGGCCCTGCATGGACATAGATGTTTGCAGTGAGCGTCAAGTTCCACTTGTTCTAGAGGTGATGAAAGAATTCTCTGAAGACATTGTCCCTTTGATAGTCCCTACGAAGCGCGGGGGTACTCAAGGTGTTCGAATTGTTTTGACAAGTTCAAAAGAGGACAAAATTCTCTTTGAGGAAGAACTTCAAAATCAAGAAGAGGAGCAAAGCAAGCGTGTTCGTGGGTTTCGAGAGGTGATCGATCTGATTTCTGCTTCCCAAAAAGCTGTTGTTGCTCACAACTCACTTGATGATTTTACGTTCGTTCACTCAAAGTTTCTGAGTCCTTTGCCGCCGAGTATTGACGAGTTCAAGTGCTCGTTACAATCAGTTTTCCCATATATCATTGATCTTGGCCATCTGATGAAGGAAATCAGCCCAATGAGAAATGTGAATAATTTACCTTCAGCTTCATCCTTCTTGAGAAGTCGGTTTTTTTCACCTGTTGATGTTGATATTCCACTAAAAGGGATGCCAGACGAGATGAAGGAAGGAAAGATCCATGGGCATAATGTCGTAAGGATAAGTTATCTGTTTGCAAAACTACAGTCTGTGCTTCATCGCAGTGACAATGGTGCTAGCTTTGCTTTTGATAACTATGCAAACATCTTCAACCCTGGCTGTGATAGCCCCCTTGAGAACTCTGATGAGGATGTCAGGGTTTTGTCAGGTAGCACAAGGAAACTGAGCTGTGATGATTTGGTCTTCTTATGGGGATTCAGAGATGGCTTGTCTGCGGGAGAGTTAAAAAGACTCCTCAGTGGATCTCATGAAGCTTTTTCTCAAGACTATGATATCCGAGTGTTGGATAAAAGCTGTGCAGTAGTTGCCTTTTGGCATCCTGGTTTGTCAGGTGCTTTCCTGGATGCTATGAATTCTGGGGGATCATTCCATGAAGGATTGAGAGATCTGATCTCCGAAGGCCTGAGAGCAGCAAGTTACCAGACCTACAAGAGGGTTTGTGACATGGGAAAGTGGGATTCAGATTTAGCTGACTCGTTGGACAAAGCTCTAGCGTCCCCTGACCCCTTTCTAGACGATAGTCACAGGAGGAACCCATATGAAATTTGTTGGGATGATGACACTATTGTCAACCTTGATGAGCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_106727.p1 GENE.R_Transcript_106727~~R_Transcript_106727.p1 ORF type:complete len:620 (+),score=118.11,CAF1|PF04857.16|4.5e-57 R_Transcript_106727:105-1964(+)
MLQKRLFCTQVTAQINKNINNSNNSIKKWRIKQVRKSTFNQVLEEVKSHICNSDFIAISLQKTGSYSAPWQRVLPFDTPQIAYLKSKRAAERFQVFQLALCPFTLRASKLTAYPYNFHLFPRDELKIGMPSYSFACQTSYLTSMARLGFDFNACIYDGISYLSRAQESAMKHLTGNSLLRANAVQSSPGSSVADSVFLERIKSKFRTWRSAFKETEAKAEDPLIKSLRKVVLGELHGSRPCMDIDVCSERQVPLVLEVMKEFSEDIVPLIVPTKRGGTQGVRIVLTSSKEDKILFEEELQNQEEEQSKRVRGFREVIDLISASQKAVVAHNSLDDFTFVHSKFLSPLPPSIDEFKCSLQSVFPYIIDLGHLMKEISPMRNVNNLPSASSFLRSRFFSPVDVDIPLKGMPDEMKEGKIHGHNVVRISYLFAKLQSVLHRSDNGASFAFDNYANIFNPGCDSPLENSDEDVRVLSGSTRKLSCDDLVFLWGFRDGLSAGELKRLLSGSHEAFSQDYDIRVLDKSCAVVAFWHPGLSGAFLDAMNSGGSFHEGLRDLISEGLRAASYQTYKRVCDMGKWDSDLADSLDKALASPDPFLDDSHRRNPYEICWDDDTIVNLDEL*

Click here to download the sequence:
Link to NCBI Protein BLAST