Transcript Information: R_Transcript_106814.p2


Annotated TAIR IDAT2G36980.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:15531161-15533038 | Forward length=625
E-Value6E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.84897492812645
Replicate 20.10850801248733
Replicate 30.059190536424167
Condition 2: 8 Hour
Replicate 10.12654193771186
Replicate 20.4044603950602
Replicate 30.51593725277586
Condition 3: 24 Hour
Replicate 10.41525749507475
Replicate 20.4559226644047
Replicate 30.62213114097124


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_106814.p2 GENE.R_Transcript_106814~~R_Transcript_106814.p2 ORF type:complete len:387 (-),score=54.12,PPR_2|PF13041.2|0.85,PPR_2|PF13041.2|4.4e-09,PPR_2|PF13041.2|4.4e+03,PPR_2|PF13041.2|0.75,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|3.9e-10,PPR_2|PF13041.2|0.042,PPR_2|PF13041.2|2.7e-05,PPR|PF01535.16|0.29,PPR|PF01535.16|0.0077,PPR|PF01535.16|1.5e+03,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|0.0032,PPR|PF01535.16|0.02,PPR|PF01535.16|1.4e-07,PPR|PF01535.16|4e+03,PPR|PF01535.16|5.9e+03,PPR|PF01535.16|0.002,PPR|PF01535.16|0.0019,PPR_3|PF13812.2|0.51,PPR_3|PF13812.2|0.46,PPR_3|PF13812.2|8.6e+02,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|16,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|8.1e+03,PPR_3|PF13812.2|95,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|14,PPR_1|PF12854.3|0.037,PPR_1|PF12854.3|4.1e+02,PPR_1|PF12854.3|4.7e+02,PPR_1|PF12854.3|8.5e+02,PPR_1|PF12854.3|21,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|0.37,PPR_1|PF12854.3|46,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|1.1 R_Transcript_106814:1683-2843(-)
ATGTGTTCTAGTTTGTTTAAGGCCACATCTCAAATTGTTGCCTCTGCAAGATCAGGTAGAATCACGGATGCCCGCAAGCTGTTCGACGAAATGACTAACAGAGACACAGTTGCTTGGAATGCCATTCTTTCTTCCTATTCTCATTTGGGTATTTACCAACAAGTCTTCTCTTTGTTCAAACTAATGAGAATCTCCAATACTAAGCCTGATCAGTTCACCTTTACGGCCACACTCAGTGCATGTGCTGGAGAAGGGGATGTGAGCTATGGTTCAATAATTCATGCCTTAGTAGTTGGTTATGGGTGCAAGAATTCCGTGCCTGTGAGAAACTCTCTGATCGACATGTATGGAAAGTGTTTGAATCCTTGTAGTGCCAGAAAAGTGTTCGAGGAGATGTGTTTAAGGAACGAAGTGTCGTGGTGTTCACTGTTGTTTTCCTATGTTAATGCTGGTCTATTTGATGCTGCTAATGATGTATTCTGGAGTATGCCGGAAAGGGTTGGAATTTCTTGGAACATAATGATTGCAGGTCATGCTCGATCAGGAGATTGTGAATTGTGCTTGAGCTTATTTAGACAAATGAGAGAAAGTAATGGTTGTTACCCTGATCAATGGACTCTGAGTGCCCTCATGAACTCTTGTACAGAAAGCAGCGAGTCTTTTTGTGGTCGTATGATCCATGCTTCTCTGGTTAAAAGTGGGTGGCATTCATCCATCGAAGTGAAAAACTCGATTTTAAGCTTCTATGCCCAACTGGGAAGTCGAGATGATATCCAGAAGGCACTTGAGTCCATTGAATATTCATCAGATCAGATTTCCTCGAATGCTGTCATTGATGCTCATATGAAGATGGGGAATACCAATGAAGCCGAGCTTCTCTTTCAACGAATACCAGAGAAAAATATCATTTCTTGGACATCTATGATTGCTGGGTTCACAAGAAACGGACAGGAAACACAAGCCATTAGCTTCTTTGTTGATTTGATGAGACATTCTGTTAGACCTGATGAGCTAGCCTTTGGTGCAGTCCTCCTTGCATGTTCTAGTTTAGCTGTACTTGGACATGGTATGATGATCCATGGTTGCTTGATACGAAATGGTTTCGATGCCTCCATAATCAATGAAAGGATTAAACTGAATAAGTGGTGGGATATTGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_106814.p2 GENE.R_Transcript_106814~~R_Transcript_106814.p2 ORF type:complete len:387 (-),score=54.12,PPR_2|PF13041.2|0.85,PPR_2|PF13041.2|4.4e-09,PPR_2|PF13041.2|4.4e+03,PPR_2|PF13041.2|0.75,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|3.9e-10,PPR_2|PF13041.2|0.042,PPR_2|PF13041.2|2.7e-05,PPR|PF01535.16|0.29,PPR|PF01535.16|0.0077,PPR|PF01535.16|1.5e+03,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|0.0032,PPR|PF01535.16|0.02,PPR|PF01535.16|1.4e-07,PPR|PF01535.16|4e+03,PPR|PF01535.16|5.9e+03,PPR|PF01535.16|0.002,PPR|PF01535.16|0.0019,PPR_3|PF13812.2|0.51,PPR_3|PF13812.2|0.46,PPR_3|PF13812.2|8.6e+02,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|16,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|8.1e+03,PPR_3|PF13812.2|95,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|14,PPR_1|PF12854.3|0.037,PPR_1|PF12854.3|4.1e+02,PPR_1|PF12854.3|4.7e+02,PPR_1|PF12854.3|8.5e+02,PPR_1|PF12854.3|21,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|0.37,PPR_1|PF12854.3|46,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|1.1 R_Transcript_106814:1683-2843(-)
MCSSLFKATSQIVASARSGRITDARKLFDEMTNRDTVAWNAILSSYSHLGIYQQVFSLFKLMRISNTKPDQFTFTATLSACAGEGDVSYGSIIHALVVGYGCKNSVPVRNSLIDMYGKCLNPCSARKVFEEMCLRNEVSWCSLLFSYVNAGLFDAANDVFWSMPERVGISWNIMIAGHARSGDCELCLSLFRQMRESNGCYPDQWTLSALMNSCTESSESFCGRMIHASLVKSGWHSSIEVKNSILSFYAQLGSRDDIQKALESIEYSSDQISSNAVIDAHMKMGNTNEAELLFQRIPEKNIISWTSMIAGFTRNGQETQAISFFVDLMRHSVRPDELAFGAVLLACSSLAVLGHGMMIHGCLIRNGFDASIINERIKLNKWWDIV*

Click here to download the sequence:
Link to NCBI Protein BLAST