Transcript Information: R_Transcript_10682.p1


Annotated TAIR IDAT3G51700.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19179443-19181145 | Reverse length=344
E-Value7E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.7087747721385
Replicate 27.746207920576
Replicate 310.118995734223
Condition 2: 8 Hour
Replicate 16.2997613699223
Replicate 28.9009335484331
Replicate 37.313513016952
Condition 3: 24 Hour
Replicate 19.1385446246201
Replicate 27.0662479940685
Replicate 37.9688245219286


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_10682.p1 GENE.R_Transcript_10682~~R_Transcript_10682.p1 ORF type:complete len:206 (+),score=11.43,PIF1|PF05970.10|8.2e-16,Herpes_Helicase|PF02689.10|9e-08 R_Transcript_10682:1221-1838(+)
ATGGTGATAGACAATTTCCCAGGCAAGGCATACACTTACAAGAGTTATGACACCACTGTCAATGACGATTGCAATGCTCACCCTATTGAATTTCTCAACACTCTGTGTCCGAGAGGTATGAGCCCACACTGTCTAACACTGAAAGTGAATTGCCCTGTCATATTGCTTCGGAATCTTAACCCCTCTGTCTGCTTATGCAATGGGACTAGGCTCATCTGTCGAGACTTTAGAGCTAATGTTATTATATGTGAGATAGCGACTTGGTACCGTGCTGGTGACTATGTTTTCATTCCACGAATCACCCTCAACCCATCGTCTTCTATTACTTATCCATACAGATTTGAGAGAAGGCAATTTCCAATCAAGTTGTGCTTTGCGATGACAATAAACAAATCACAAGGACAAACACTTACTGATGTTGCTGTTTACCTTCGAAGACAATGCTTCTCCCACGGGCAACTGTATGTTGCACTATCAAGGGCCAAAAAGGCAAGTAGTGTCAAGTTGTTTGTCAAGCCTAGCAAAGAAAGTGAAACAAACGTAACATCCGTCACCAATATTGTGTCATTTGATTTGTGCCAGAGCACTTTCAGGAACACCACCTGGAGTAGAGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_10682.p1 GENE.R_Transcript_10682~~R_Transcript_10682.p1 ORF type:complete len:206 (+),score=11.43,PIF1|PF05970.10|8.2e-16,Herpes_Helicase|PF02689.10|9e-08 R_Transcript_10682:1221-1838(+)
MVIDNFPGKAYTYKSYDTTVNDDCNAHPIEFLNTLCPRGMSPHCLTLKVNCPVILLRNLNPSVCLCNGTRLICRDFRANVIICEIATWYRAGDYVFIPRITLNPSSSITYPYRFERRQFPIKLCFAMTINKSQGQTLTDVAVYLRRQCFSHGQLYVALSRAKKASSVKLFVKPSKESETNVTSVTNIVSFDLCQSTFRNTTWSRE*

Click here to download the sequence:
Link to NCBI Protein BLAST