Transcript Information: R_Transcript_10684.p2


Annotated TAIR IDAT3G51700.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19179443-19181145 | Reverse length=344
E-Value7E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.771009400254
Replicate 220.096458969885
Replicate 321.488701459248
Condition 2: 8 Hour
Replicate 120.055089385363
Replicate 222.999764179505
Replicate 321.090442816069
Condition 3: 24 Hour
Replicate 125.909525299838
Replicate 216.909031816109
Replicate 319.803161383383


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_10684.p2 GENE.R_Transcript_10684~~R_Transcript_10684.p2 ORF type:complete len:210 (+),score=12.26,PIF1|PF05970.10|8.5e-16,Herpes_Helicase|PF02689.10|1.4e-07 R_Transcript_10684:1193-1822(+)
ATGGTGATAGACAATTTCCCAGGCAAGGCATACACTTACAAGAGTTATGACACCACTGTCAATGACGATTGCAATGCTCACCCTATTGAATTTCTCAACACTCTGTGTCCGAGAGGTATGAGCCCACACTGTCTAACACTGAAAGTGAATTGCCCTGTCATATTGCTTCGGAATCTTAACCCCTCTGTCTGCTTATGCAATGGGACTAGGCTCATCTGTCGAGACTTTAGAGCTAATGTTATTATATGTGAGATAGCGACTTGGTACCGTGCTGGTGACTATGTTTTCATTCCACGAATCACCCTCAACCCATCGTCTTCTATTACTTATCCATACAGATTTGAGAGAAGGCAATTTCCAATCAAGTTGTGCTTTGCGATGACAATAAACAAATCACAAGGACAAACACTTACTGATGTTGCTGTTTACCTTCGAAGACAATGCTTCTCCCACGGGCAACTGTATGTTGCACTATCAAGGGCCAAAAAGGCAAGTAGTGTCAAGTTGTTTGTCAAGCCTAGCAAAGAAAGTGAAACAAACGTAACATCCGTCACCAATATTGTGTCATTTGATTTGTTAAGAAGAGCAGGCATAATGCCAGAGAACTTTCAGGAACACCGCCTGGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_10684.p2 GENE.R_Transcript_10684~~R_Transcript_10684.p2 ORF type:complete len:210 (+),score=12.26,PIF1|PF05970.10|8.5e-16,Herpes_Helicase|PF02689.10|1.4e-07 R_Transcript_10684:1193-1822(+)
MVIDNFPGKAYTYKSYDTTVNDDCNAHPIEFLNTLCPRGMSPHCLTLKVNCPVILLRNLNPSVCLCNGTRLICRDFRANVIICEIATWYRAGDYVFIPRITLNPSSSITYPYRFERRQFPIKLCFAMTINKSQGQTLTDVAVYLRRQCFSHGQLYVALSRAKKASSVKLFVKPSKESETNVTSVTNIVSFDLLRRAGIMPENFQEHRLE*

Click here to download the sequence:
Link to NCBI Protein BLAST