Transcript Information: R_Transcript_107068.p1


Annotated TAIR IDAT2G34680.1
Annotated Gene NameOuter arm dynein light chain 1 protein
Annotated Gene Symbol(s)AIR9
Annotation TypeOrtholog
Chromosome Positionchr2:14616947-14628300 | Reverse length=1708
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2709649979194
Replicate 22.2478678107727
Replicate 33.6852274604921
Condition 2: 8 Hour
Replicate 13.0040528754722
Replicate 22.4457214513797
Replicate 34.1597441005053
Condition 3: 24 Hour
Replicate 15.9121667918567
Replicate 23.6758764817629
Replicate 36.2825819008687


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_107068.p1 GENE.R_Transcript_107068~~R_Transcript_107068.p1 ORF type:complete len:1728 (+),score=395.78,LRR_4|PF12799.3|0.038,LRR_4|PF12799.3|1.7e-06,LRR_4|PF12799.3|0.52,LRR_4|PF12799.3|3.7e+03,SCAB-IgPH|PF16709.1|0.035,SCAB-IgPH|PF16709.1|4.9,SCAB-IgPH|PF16709.1|6.4e+02,SCAB-IgPH|PF16709.1|5.8e+02,SCAB-IgPH|PF16709.1|1.3e+03,SCAB-IgPH|PF16709.1|1.9,LRR_8|PF13855.2|6.7,LRR_8|PF13855.2|0.00017,LRR_8|PF13855.2|0.42,LRR_8|PF13855.2|7.2e+03,LRR_9|PF14580.2|0.002,LRR_9|PF14580.2|10,LRR_9|PF14580.2|3.8e+03 R_Transcript_107068:263-5446(+)
ATGGAGGACCCAGTTGTGCAATCTTTTGAGAATGTGGTGCTTGGGCCTGTAGTCATGGAATCACCAGAGAAACTAGGTGTTGTTTCTGAAGTAGTTGGGGAACCAACCACTTCATTGACATCTAAGGTTGCTGGAACTGATGGTTCTACTAGAAAGCATGTGGAAATCAGGAGTGGTTCGACTTCTAAGTTGGGTGCAAATAGATCAAGGGTTAGCAGGACTTCACAGAACTCTACAGCTGTATCACAAAGTGTAAGAAGAAATAGCACTGGTGGGTTCGGTGAGAAGCAGTCAATCCCAGCTAGAAAACATCAGGGTAGTGCTGGTTCGACAGGAAGAAACAACAGTAGCGCTTCTGGTTCCGAGCCATTACGTCGATCTTTTCCAGAAATGAGGAGTTCGATGATTTCCAGTTCTAGTAAGAGTAGAAGTATAGTGCTGACTAGAGAAATGAAGAAGTTGGGGCCAGTTTCACCTGGTACTAAAGCTTCGAGGACAACTACTAGCTCTAGTGGGAGTAAGACTGTTTCTGTTAACAAGCCATCATTTACACAGTCTATAAGTTCTTCGTCAAGGAAGTTTAATTCTTCTTCATTAGACAGTACAGCCAGTAGCACTGTAAAAAAATCGGTCTCAAAGCTGTCTACACCTTCAGCTAAATCCTCTTCAGTTGCAAGTGGGGTGAAAAGAGCTACTGGTCTTCCTTCGCCTTTAGCTCGATCACCATCTTTAAGCAGTGCGGTGAAAAAGGGTTCGTTGTCATCCTCGCGGGACCAGGGTTCAATTTTATCTGGTCGGAGGAAGGTAGTCACCCCAGAACAGCGTGATTCTCACTTGACAGTTCTATCACAAGTGGAGATCAAGGGTGGTGATGATGTGAGGCTGGATCTTAGAGGTCAGAGAATATGCAGTTTGAAAATGAATGGGGTGAATTTGTCACAGAATCTAGAGTTTGTTTATCTCAGGGACAATCTGCTATCATCGCTAGAAGGAATTGAAATATTGAAGCATGTGAAGGTGATTGACTTAAGTTTCAATGATTTTAGAGGGCCTGGATTTGAACCACTTGGAAACTGCAAAGTCCTGCAGCAACTATATCTTGCTGGGAATCAGATCACATCACTTTCAAGTCTACCTGAGCTTCCTAATTTGGAGTTTCTTTCTGTAGCTCAAAATAAGCTAAAGTCTCTGTCTATGGCGAGTCAGCCTCGACTACAGGTTTTGGCTGCAAGCAAAAACAAAATATCATCTCTTAAGGGTTTTCCACACTTACCAGTTCTTGAGCATCTAAGAGTTGAAGAGAATCCCATTCTAAGAATGCCGCATTTAGAAGCAGCATCCATCTTGCTTATTGGTCCAACTTTAAAGAAGTTCAATGATAGAGACCTTTCAAAAGAAGAAATTGCAATTTCTAAACAATATCCTACTCATACTGCCCTTTGCATCAGAGATGGTTGGGAATTCTGCTCCCCAGAACATGCTACAGAGTCAACTTTTAACTTCCTCGTTGAACTCTGGAAAGATCATTTGCCTCATGGATTTCAGCTCAAGGAGGCATCTATTGATCCACCCTTTGAGGAAGATGCTTGTCGTTGCCACTTTATTTTCTTTAGGGATCCTGGAATTGGTGCAAAATTGGTTATGAAATATCAATGGTATGTGGGAGAGAGAGCTCTTTCAACTTTCAACATCATTCCTGATGCCAGTTCTGAGGTCTATAGTCCAAAGCATTTTGATGTTGGAAAGCATTTGAAAGTTGAATGCATCCCTATATTAGAAGAGACAGAGTATCCACCTATTTTTGCAATTTCTTCAATGGTTTCCCCTGGAACTGGATGCCCAAAGGTCTTGAACCTTGATGTGCGTGGAGACCTTGTGGAAGGAAATATCATTAGGGGCTTTGCTGAAGTTGCTTGGTGTGGTGGGACTCCAGGAAACGGTGTGGCCAGTTGGTTAAGGAGAAAATGGAACAACAGCCCTGTGCTAATTTTAGGAGCTGAAGATGAGGAGTATCGATTAACTATGGATGATATTGATTCAAGTTTAGTTTTTATGTACACACCAGTGACAAAGGAAGGAACAAAAGGTGAACCTCAGTATGCAGTCACTGATTTCGTAAAGGCAGCTCCTCCGTCCGTCTCTAATGTAAGGATCATTGGAGAGTATGTCGAAGGCAATGTTATTAAGGGTGTAGGAGATTACTTTGGAGGGCATGAAGGTCCCAGCAAGTTTGAGTGGTCACGTGAGGATAAGGAGACAGGAGAACTGGAGTTAGTCTTGGCTGGTGCTGCTGAATATATTTTGACAAGGGAGGATGTTGGCCACCGCATGGCTTTCAGTTATATACCTGTCAATTTTGAGGGTAAAGAAGGTGAATCTGTGTCAACGGTTTCAGATGTGGTGAGGCAAGCACCACCAAAAGTAACAAGCTTAAGAATTGTTGGTATACTAAGAGAGGGGAGTAAGATTATTGTAACTGGTACAGTTACTGGAGGTACTGAAGGTTCTAGTAGAGTTCAGTGGCTTAAATCCAAGTCTTCTACCTTCACTGGAGAGGAAGGGCTTGAAGCCTTGAGCACATCCAAGATTTCCAAGGCCTTACGCATACCTCTAGATGCAGTTGGCCACTATATCGTTGCAAAGTTTACTCCTATGACACCTGATGGTGAAACTGGTAAAGCAGCATATGTAGTATCAGAAAACAGCATTGAGACTCTTTCCCCAAGCCTAAACTTCTTGTCTGTAACTGGTGATTATGCTGAAGGAGAAATGTTGACAGCATCATATGGTTATATAGGCGGCCATGAAGGGAAAAGCATCTATAATTGGTATCTTCATGAGGTTGAAACTGATACAGGTACCTTAATAAATGAAGTTTCTGGACATCTTCAGTTCCGGCTCCCAAAGCAAGCCATTGGTAAATTCGTCTCCTTCAAGTGTATACCGGCTCGAGATGATGGTGTGATAGGTGAACCAGGAATTTGCATAGGGAAAGAGCGTGTTTGTGCTGGAAGCCCAAGGGTGATATCACTTCATATAGTTGGCAAGTCTATTGAAGGATCAACGTTGATTGTGGACAAAGTATATTGGGGTGGTGAAGAAGGCGAGTCAATCTTTCGCTGGTTTCGGACGAGCTCTGATGGGCAACGAAGTGAAATCTGTGGTGCTAGAACGCCATCATACATGCTTTTAGTTGATGATATTGGATGCTTTATATCAGTATCTTGCGAACCTGTTAGAAGTGATTGGGCACGTGGTCCAGTTGTACTTTCTGAGCAGTTTGGTCCAATAGCACCTGGTATTCCAACCTGTCAGACTCTCGAGCTCTCAGGATCAATGATAGAAGGCCAACGATTGACCTTCATTGCATCCTATAGTGGAGGGGAGAGAGGCAACTGCTTTCATGACTGGTTTAGAGTCGAAAGCAATGGTCGCAAGGAAAAATTATGTGCCAATGATTTCCTAGATTTAGTTCTTGAGGATGTTGGATGCTGCATTGAGTTGGTCTTCACACCCGTAAGGAATGACGGAGAAAGAGGGACATTCCGGACTATTTTATCTGATGTTATCATGCCTGCTGATCCTGTGGGTTTAGAGCTCTCAATTCCAGCTTGTTGTGAGGCTCAGGAGGTGCTTCCACAAAGGACTTACTATGGTGGGAAGGAAGGTGTTGGGGAATATATTTGGTACAGAGCAAAGGATAAGCTTCATCAATCAGCTTTGATTCGGTTATCTGATTCATGTGAAAATGTTGTCTTATGTGGAAGAGAGTTCACATACAAACCATCTCTTGATGACGTGGGGGCTTATTTGGCATTGTATTGGGTTCCTATTCGTGAAGACAGGAAATGCGGCGAGCCATTGGTCTCAATCAGCAATGATCCAGTTGTGCCAGCTCATCCAGTTGTCTCTGATGTTTGTGTGAAGACCTTGACTTTGAGCACCTATTCTGGTCAAGGACAGTATTTTGGGGGACACGAAGGATCAAGTTTGTTTAGCTGGTATAGAGAAACTGCTGATGGCACTATTACTTTAATAAGTGGTGCTAGTTCTCGGACTTACAAAGTTACTGATTCAGATTACAATTGCCGTTTGTTGTTTGGGTATACGCCAGTTCGTTCAGATTCTGTCATCGGGGAACTCAAGCTGTCTGATCCGACAGAAGTGATTCTTCCAGAGCCTTTGAAGATTGAGATGATTGCTCTTACTGGAAAAGCTGTAGAAGGAGAAATTCTGACTGCAGTAGAAGTTATTCCAAATGATGATGGGCAGCACATTGTCTGGAGCAAGTACAAGAAAGATGTCAAATATCAATGGTACTATTCTCCCAAGTCTGAGGATGATGAGTCCTTTGAGAATCTATTATCGCAGAATTCCTGTTCTTATAGATTGCGATATGAAGACATTGGCAGATGCCTGAAATGTGAGTGTATTGTAAGTGATGTGTTTGGAAGGGCAAGCAAGCCAGCATATGCTAAAACTACACCAGTATTGCCAGGAATTCCAAGAATAGATAAATTGGAGATTGAGGGAAGAGGATTCCATACAAATTTATACGCTGTTCATGGATTGTATAGTGGAGGGAAAGAAGGAAAAAGTAGAATACAGTGGCTTAGATCCATGATTGGCAGTCCTGATCATATCTTGATTCCTGGAGAGAGAGGAAGGATGTATGAGGCTAATGTCGATGATGTCGGATACAGGCTAGTGGCTATATACACACCAGTGAGAGAAGATGGTGTTGAGGGAAAGCCCATCTCTTCATCAACAGAGCCAATAGCAGTTGAACCAGATATTTTTGAAGAAGTGAAGAAGCTTGACATGGGGTCTGTGAAGTTTGAGGTATTGTGCAACAAGGCTTCAACGTCCAAAAAGCCCTCGGATACTGGAGTTCTTGAAAAAAGAATCCTTGAAATTAATCGAAAGAGAGTGAAGGTTGTGAAGCCTGGGTCTAAGACTTCATTCCCAAGCACTGAATTGCGTGGAAGTTATGCTCCACCATTCCATGTGGAGCTTTTCTGCAATGATCAACATCGGCTAAGAGTTGTGGTTGATAGTGAGAACGAAGTAGATATCATGGTGCATACACGACATTTAAGGGATGTGATTGTGCTTGTTCTCCGAGGATTTGCACAGAAGTTCAATAGCACGTCTCTGAATACATTGTTGAAAATGGAAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_107068.p1 GENE.R_Transcript_107068~~R_Transcript_107068.p1 ORF type:complete len:1728 (+),score=395.78,LRR_4|PF12799.3|0.038,LRR_4|PF12799.3|1.7e-06,LRR_4|PF12799.3|0.52,LRR_4|PF12799.3|3.7e+03,SCAB-IgPH|PF16709.1|0.035,SCAB-IgPH|PF16709.1|4.9,SCAB-IgPH|PF16709.1|6.4e+02,SCAB-IgPH|PF16709.1|5.8e+02,SCAB-IgPH|PF16709.1|1.3e+03,SCAB-IgPH|PF16709.1|1.9,LRR_8|PF13855.2|6.7,LRR_8|PF13855.2|0.00017,LRR_8|PF13855.2|0.42,LRR_8|PF13855.2|7.2e+03,LRR_9|PF14580.2|0.002,LRR_9|PF14580.2|10,LRR_9|PF14580.2|3.8e+03 R_Transcript_107068:263-5446(+)
MEDPVVQSFENVVLGPVVMESPEKLGVVSEVVGEPTTSLTSKVAGTDGSTRKHVEIRSGSTSKLGANRSRVSRTSQNSTAVSQSVRRNSTGGFGEKQSIPARKHQGSAGSTGRNNSSASGSEPLRRSFPEMRSSMISSSSKSRSIVLTREMKKLGPVSPGTKASRTTTSSSGSKTVSVNKPSFTQSISSSSRKFNSSSLDSTASSTVKKSVSKLSTPSAKSSSVASGVKRATGLPSPLARSPSLSSAVKKGSLSSSRDQGSILSGRRKVVTPEQRDSHLTVLSQVEIKGGDDVRLDLRGQRICSLKMNGVNLSQNLEFVYLRDNLLSSLEGIEILKHVKVIDLSFNDFRGPGFEPLGNCKVLQQLYLAGNQITSLSSLPELPNLEFLSVAQNKLKSLSMASQPRLQVLAASKNKISSLKGFPHLPVLEHLRVEENPILRMPHLEAASILLIGPTLKKFNDRDLSKEEIAISKQYPTHTALCIRDGWEFCSPEHATESTFNFLVELWKDHLPHGFQLKEASIDPPFEEDACRCHFIFFRDPGIGAKLVMKYQWYVGERALSTFNIIPDASSEVYSPKHFDVGKHLKVECIPILEETEYPPIFAISSMVSPGTGCPKVLNLDVRGDLVEGNIIRGFAEVAWCGGTPGNGVASWLRRKWNNSPVLILGAEDEEYRLTMDDIDSSLVFMYTPVTKEGTKGEPQYAVTDFVKAAPPSVSNVRIIGEYVEGNVIKGVGDYFGGHEGPSKFEWSREDKETGELELVLAGAAEYILTREDVGHRMAFSYIPVNFEGKEGESVSTVSDVVRQAPPKVTSLRIVGILREGSKIIVTGTVTGGTEGSSRVQWLKSKSSTFTGEEGLEALSTSKISKALRIPLDAVGHYIVAKFTPMTPDGETGKAAYVVSENSIETLSPSLNFLSVTGDYAEGEMLTASYGYIGGHEGKSIYNWYLHEVETDTGTLINEVSGHLQFRLPKQAIGKFVSFKCIPARDDGVIGEPGICIGKERVCAGSPRVISLHIVGKSIEGSTLIVDKVYWGGEEGESIFRWFRTSSDGQRSEICGARTPSYMLLVDDIGCFISVSCEPVRSDWARGPVVLSEQFGPIAPGIPTCQTLELSGSMIEGQRLTFIASYSGGERGNCFHDWFRVESNGRKEKLCANDFLDLVLEDVGCCIELVFTPVRNDGERGTFRTILSDVIMPADPVGLELSIPACCEAQEVLPQRTYYGGKEGVGEYIWYRAKDKLHQSALIRLSDSCENVVLCGREFTYKPSLDDVGAYLALYWVPIREDRKCGEPLVSISNDPVVPAHPVVSDVCVKTLTLSTYSGQGQYFGGHEGSSLFSWYRETADGTITLISGASSRTYKVTDSDYNCRLLFGYTPVRSDSVIGELKLSDPTEVILPEPLKIEMIALTGKAVEGEILTAVEVIPNDDGQHIVWSKYKKDVKYQWYYSPKSEDDESFENLLSQNSCSYRLRYEDIGRCLKCECIVSDVFGRASKPAYAKTTPVLPGIPRIDKLEIEGRGFHTNLYAVHGLYSGGKEGKSRIQWLRSMIGSPDHILIPGERGRMYEANVDDVGYRLVAIYTPVREDGVEGKPISSSTEPIAVEPDIFEEVKKLDMGSVKFEVLCNKASTSKKPSDTGVLEKRILEINRKRVKVVKPGSKTSFPSTELRGSYAPPFHVELFCNDQHRLRVVVDSENEVDIMVHTRHLRDVIVLVLRGFAQKFNSTSLNTLLKMET*

Click here to download the sequence:
Link to NCBI Protein BLAST