Transcript Information: R_Transcript_107182.p1


Annotated TAIR IDAT4G21350.1
Annotated Gene Nameplant U-box 8
Annotated Gene Symbol(s)B80, PUB8
Annotation TypeOrtholog
Chromosome Positionchr4:11356143-11357267 | Reverse length=374
E-Value1.3E-143
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.299779571477
Replicate 213.417421923784
Replicate 313.535799488636
Condition 2: 8 Hour
Replicate 112.504813382149
Replicate 219.371459135145
Replicate 319.607622167477
Condition 3: 24 Hour
Replicate 118.722275947727
Replicate 214.094136029005
Replicate 317.439935820041


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_107182.p1 GENE.R_Transcript_107182~~R_Transcript_107182.p1 ORF type:complete len:374 (+),score=26.33,U-box|PF04564.11|8.1e-21,Arm|PF00514.19|0.33,Arm|PF00514.19|7.7e+03,Arm|PF00514.19|0.27,Arm|PF00514.19|0.054,Arm|PF00514.19|3.4e+03,Arm|PF00514.19|0.53,zf-RING_UBOX|PF13445.2|3.6e-06,zf-RING_UBOX|PF13445.2|5.5e+03,zf-Nse|PF11789.4|2.7e-06 R_Transcript_107182:63-1184(+)
ATGGGGAGTGAGTTGCCGGAATACTTCAAGTGCCCGATATCTCTAGAAATAATGTCGGACCCGGTAATTCTCTCGTCGGGTCACACCTTTGATCGGAGCTCCATCCAAAAATGGATCGACTCCGGTCACCGTACTTGTCCAATTACCAAACTACCCCTCCCTGACCCTCCCCCTCTTATCCCTAACCACGCCCTCCGTAGCCTCATTTCCAATTATACTCCTCACCACCACCTTCAATCAGCTCAATCCGACTCGCCTCCCAACCCACTGAGTCAACTCGGATCCTTAATCTCCACTCTCACATCCTCTAAATCCTCCCCTGCCTCGAAGCTCGACTCGCTGACTCAACTCACCGCTTTGTCAAAATCCAACCCGGGTCTCCGCGCTAGACTCACTGAGTCAGGCGCCGTCTCGGCCGTGTTGCGCTGTGTTGACTCGGACGATTCAGCCCTCCAGGAAACTTCGCTATCTTTACTGCTGACACTGAGTTTGGACTCCGATGACAACAAGGTAGGGCTGGTGGCGGAGGGGGCGGTGGGGAAGCTGGTGGTAGCCGCGCTGCCAACACGCGGCAATGCGGCTGCCCTGGCGGCGACGGTTCTTACAAGCCTCGCCGTCGTGGAGGTGAACAAGGCCACCATCGGCGCATACCCAGGCGCCGTGCGTGGCCTTGTTCACCTCCTTTCTACCGGGAAAGGAAGAGCTAGAAAAGAGGCGGCCACCTGCCTCTTTGCTATCTCTTCCTTTCCCGAGAACCGCCGCAGGGCGGTTGACTGCGGAGCAGTCCCGGTCCTCGTTAAGATGGCCCGGGCGGGGCTCGAGCGGGCCGTCGAGGTGCTGGGGCTGCTCGCGAAGTGCCAACAAGGGAGAGAAGAGATGGCAAAGTGTGATGGGGTTGTTGAAATTTTGGTGGGTTTTGTAAGGGATGGAAGTTCAAGAGGTGTTCAATATGGGTTGATGGCACTCAATTGTCTTTGCTCTTGGAGTGAGGAGATTAAAGAGGAAGTTAGGAATGAAGGGGTTTTGGAGATTTGTTTGGGTTTAATTGAAGATGATAATGAAAAGATTAGGAGGGTTGCTTCTAATTTAGCCCAAGTTTTTCAAGACAAGAATGGAAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_107182.p1 GENE.R_Transcript_107182~~R_Transcript_107182.p1 ORF type:complete len:374 (+),score=26.33,U-box|PF04564.11|8.1e-21,Arm|PF00514.19|0.33,Arm|PF00514.19|7.7e+03,Arm|PF00514.19|0.27,Arm|PF00514.19|0.054,Arm|PF00514.19|3.4e+03,Arm|PF00514.19|0.53,zf-RING_UBOX|PF13445.2|3.6e-06,zf-RING_UBOX|PF13445.2|5.5e+03,zf-Nse|PF11789.4|2.7e-06 R_Transcript_107182:63-1184(+)
MGSELPEYFKCPISLEIMSDPVILSSGHTFDRSSIQKWIDSGHRTCPITKLPLPDPPPLIPNHALRSLISNYTPHHHLQSAQSDSPPNPLSQLGSLISTLTSSKSSPASKLDSLTQLTALSKSNPGLRARLTESGAVSAVLRCVDSDDSALQETSLSLLLTLSLDSDDNKVGLVAEGAVGKLVVAALPTRGNAAALAATVLTSLAVVEVNKATIGAYPGAVRGLVHLLSTGKGRARKEAATCLFAISSFPENRRRAVDCGAVPVLVKMARAGLERAVEVLGLLAKCQQGREEMAKCDGVVEILVGFVRDGSSRGVQYGLMALNCLCSWSEEIKEEVRNEGVLEICLGLIEDDNEKIRRVASNLAQVFQDKNGN*

Click here to download the sequence:
Link to NCBI Protein BLAST