Transcript Information: R_Transcript_107211.p1


Annotated TAIR IDAT5G15700.2
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5115572-5121609 | Reverse length=1051
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4325614311658
Replicate 21.3890169978184
Replicate 32.1523109150747
Condition 2: 8 Hour
Replicate 13.6388389902426
Replicate 24.309239932961
Replicate 35.7256758332764
Condition 3: 24 Hour
Replicate 12.6193471333622
Replicate 22.030014241127
Replicate 33.0218882789197


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_107211.p1 GENE.R_Transcript_107211~~R_Transcript_107211.p1 ORF type:complete len:1043 (+),score=219.89,RNA_pol|PF00940.15|2.3e-161,RPOL_N|PF14700.2|1.8e-85 R_Transcript_107211:393-3521(+)
ATGTCCAATAGCAGCCCCCCTTTACTCCCTGCAACTTCAAGGCAGAATTTCGATTGTCCTTTTCTAATTCACAAATCTACTCGTAGTTTCCTCACAATCCCACATTTTGATTCCCCAGTTATGTGGAGAAACTTTGCAAAGCAAGCTATTCCCATCAAGGCTAAAACCCCTAAATTGACTTTAAACCCCTTTTCTCTTTCACGCCCTTATTGCTTTCTTGGGGTCTCCCATGATTCAGGTCTTATTGAGAAGTTAAAGTTCAGGCCCTTTGATATCGCTTCTTGTAAGAACTTGAAATTTCCTGAGGTGGGTTTTTGTCGAAATGGCGGTTCTTCAGTTAAAGAAGAGATCTTTGAGAAACCCATTTCAGGATGCTTGAGTAGTAGTCAAGCTAGTAGTAAGTTTCATGGGTTTTGCCCTAAAGGGTATGCAAGTATTGCCGAGGCTGAAGTGACATCATCTACAGATTTTGAAGAAAATATTTCAGTGTTGGATGAAATTCAGGAACTTGTGGATGAGATGAGGAAAGAGGAGAAGAGGGCGAAATGGCGCGAGTTGCGACAAAGACAGCCAAAAATTGTGGCGGGTTTGGCTCCTTATAGGTACCAAACCCTTAAGAATAGGCAAGTGAAGCTTGAGACTGAGACATGGCAACAGGCTGTGAATGAGTATAAGGAGCTTTTGAGTGAAATGTGTAAGCATAACTTGGCACCCAATTTGCCTTATGTCAAGTCTTTGTTTCTTGGCTGGTTTGAGCCTTTAAGAGATGCCATTATGGAGGAGCAAGAGCGAATTCGGCAAGGGAAATGCAGAGCTGGTTATGCACCCTATTTTGATCAATTACCTGCTGATATGATGACTATTATAACAATGCATAAATTGATGGGGATGTTAATGACTGGAAGTGGACATGGCACTGCAAAGGTTGTTCATGCAGCTTGTGCAATCGGTGAAGCCATCGAACAGGAAGTTAGAATACACAAATTCTTGGAGAAAACAAAGAAGAAAAAGGGTGATCAGGATAAAAAGACTGAAGGAGATGATTCTGATTCTTTGCTTCAAGAGCAACAGGAGCTAAGAAAAAATGTGGGTTATTTAGTGAAGAAGCAAAAGCGGCGACAAGTCCTGAAAATAGTCTCTTCACATGATGACTCAAGGCCCTGGAGTGCAGAGGCAAGGGCTAAGGTTGGCAGCCGTCTAATAGAATTGCTGGTTAAAACTGCATACATACAACCTCCAGCCAATCAATCAGTTGATGATTCACTTGATCTTCGACCTGCATTTGTGCACACGTTGAGGACTGTCGGTCCTGAGAATAAGAAAGTTACCCGACGATACGGAGTAATTGAATGTGACCCACTGGTTATCAAAGGTCTAGAGAAAACTCCGAGGCACATGGTCATTCCCTATATGCCAATGCTGGTGCCACCAGAAAAATGGACAGGTTATGACAAAGGTGCGTACTTGGTTTTGCGATCGTATGTGATGCGAACTCATGGGTCCAAATATCAGCGCGATGCAGTAAAGAGGGCCCCCAAGAAGCAGCTGGAGTCAGTTTTTGAGGCCCTGGATACTCTTGGAAGTACAAAATGGAGAGTAAACGATAAAGTCCTTAGCATTGTGGATAGGATATGGGCAAGTGGAGGTCATTTAGCTGACTTGGTTGATCGCGATGATGTTCCTTTGCCAGAACAACCAGATACAGAAGATGAATTGGAGCTTAGGAAATGGAAGTGGAAGGTCAGATCTGTGAAGAAAGTTAATAGGGAGCGACATTCTCAGCGGTGTGATATAGAACTCAAACTTGCGGTTGCTCGGAAAATGAGGGATGAGGAAGGTTTCTACTATCCACACAACATCGACTTTCGTGGCCGTGCATACCCCATGCATCCATACTTGAACCATCTTGGATCTGACATGTGCCGAGGCATCTTGGAGTTCGCCGAGGGGCGTCCTCTTGGAAACTCAGGATTGCGCTGGCTAAAAATACACTTGGCAAATTTATTTGGTGGTGGCATTGACAAATTATCTCACGAGGGTCGAATAGCATTTGCTGAGAATCATTTGGATGATATCTTTGATTCTGCGGATAAACCACTGGAAGGAAAGCGTTGGTGGTTAAAAGCAGAAGATCCTTTCCAGTGTTTGGCTGTCTGCATTGATTTAGCTGCCGCTCTGAGAAGCTCGTCCCCTCAGTCATTCATTTCTCATATACCAGTTCATCAGGATGGTTCATGCAATGGGCTACAACACTATGCTGCTCTCGGGAGAGACAAGCTGGGAGCAGTTGCTGTTAATCTTGTTGCGGGAGAAAAACCTGCAGATGTTTACTCAGGAATCGCTGCAAGGGTCCATGATATCATGAAAATTGATGCTCAACAAGATCCTGTGGATTTTCCTGATGCAATACGTGCAAGGCAGTTGATCAATCAGGTGGACAGGAAACTGGTGAAGCAGACAGTAATGACATCAGTTTACGGTGTCACATATGTCGGTGCTAGAGACCAGATCAAGCGGAGGCTGAAGGAACGTAATGTATTCAATGATGATGGGGAGCTTTTTGCTGCATCTTGTTATGCTGCAAAGACTACATTAACTGCGCTTGGAGAGATGTTTCAAGCTGCCCGTGGTATTATGAGCTGGCTCGGTGACTGTGCAAAGATAATTGCATCTGAAAATCAGCCTGTGAGGTGGACAACACCACTGGGTCTCCCTGTTGTGCAACCATACTGCAAGAAAGGCAGACATCTAATAAGAACATCCCTTCAGATGTTGACACTCGAAAGGGAAAGTGAAAAGATTATGGTGAAGCGGCAAAGAACAGCTTTCCCACCAAATTTTGTTCACTCGCTTGATGGTTCGCATATGATGATGACCGCACTTGCTTGCAAAAAGGCAGGATTAAAATTTGCAGGAGTTCATGATTCTTATTGGACACATGCATGTGATGTTGATCAAATGAGCAGGATACTTAGGGAGAAATTTGTGGAACTTTATGAGCAACCAATACTGGAAAAGTTGTTAGAGAGTTTCCAGCAATCTTTCCCTACATTATCCTTCCCTCCTTTGCCAGAGCGAGGAGACTTTGATCTGAGGGAAGTTTTGGGCTCGCCATATTTCTTCAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_107211.p1 GENE.R_Transcript_107211~~R_Transcript_107211.p1 ORF type:complete len:1043 (+),score=219.89,RNA_pol|PF00940.15|2.3e-161,RPOL_N|PF14700.2|1.8e-85 R_Transcript_107211:393-3521(+)
MSNSSPPLLPATSRQNFDCPFLIHKSTRSFLTIPHFDSPVMWRNFAKQAIPIKAKTPKLTLNPFSLSRPYCFLGVSHDSGLIEKLKFRPFDIASCKNLKFPEVGFCRNGGSSVKEEIFEKPISGCLSSSQASSKFHGFCPKGYASIAEAEVTSSTDFEENISVLDEIQELVDEMRKEEKRAKWRELRQRQPKIVAGLAPYRYQTLKNRQVKLETETWQQAVNEYKELLSEMCKHNLAPNLPYVKSLFLGWFEPLRDAIMEEQERIRQGKCRAGYAPYFDQLPADMMTIITMHKLMGMLMTGSGHGTAKVVHAACAIGEAIEQEVRIHKFLEKTKKKKGDQDKKTEGDDSDSLLQEQQELRKNVGYLVKKQKRRQVLKIVSSHDDSRPWSAEARAKVGSRLIELLVKTAYIQPPANQSVDDSLDLRPAFVHTLRTVGPENKKVTRRYGVIECDPLVIKGLEKTPRHMVIPYMPMLVPPEKWTGYDKGAYLVLRSYVMRTHGSKYQRDAVKRAPKKQLESVFEALDTLGSTKWRVNDKVLSIVDRIWASGGHLADLVDRDDVPLPEQPDTEDELELRKWKWKVRSVKKVNRERHSQRCDIELKLAVARKMRDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDMCRGILEFAEGRPLGNSGLRWLKIHLANLFGGGIDKLSHEGRIAFAENHLDDIFDSADKPLEGKRWWLKAEDPFQCLAVCIDLAAALRSSSPQSFISHIPVHQDGSCNGLQHYAALGRDKLGAVAVNLVAGEKPADVYSGIAARVHDIMKIDAQQDPVDFPDAIRARQLINQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERNVFNDDGELFAASCYAAKTTLTALGEMFQAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYCKKGRHLIRTSLQMLTLERESEKIMVKRQRTAFPPNFVHSLDGSHMMMTALACKKAGLKFAGVHDSYWTHACDVDQMSRILREKFVELYEQPILEKLLESFQQSFPTLSFPPLPERGDFDLREVLGSPYFFN*

Click here to download the sequence:
Link to NCBI Protein BLAST