Transcript Information: R_Transcript_107215.p1


Annotated TAIR IDAT1G68990.2
Annotated Gene Namemale gametophyte defective 3
Annotated Gene Symbol(s)MGP3
Annotation TypeOrtholog
Chromosome Positionchr1:25935499-25940755 | Reverse length=983
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8518235933787
Replicate 23.1825521485538
Replicate 34.707183107246
Condition 2: 8 Hour
Replicate 15.0316833360565
Replicate 26.6650441296718
Replicate 38.2540894682736
Condition 3: 24 Hour
Replicate 17.7771615532304
Replicate 26.7310047478873
Replicate 37.9490443267776


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_107215.p1 GENE.R_Transcript_107215~~R_Transcript_107215.p1 ORF type:complete len:983 (+),score=225.25,RNA_pol|PF00940.15|2.1e+03,RNA_pol|PF00940.15|2.9e-162,RPOL_N|PF14700.2|3.9e-83 R_Transcript_107215:173-3121(+)
ATGTGGAGAAAAGCGTTCAAGCTAGACACTTTAAGGAAGCTTAAACCCTCCTCAAATCTCACAAGGCCTAAACAATCACAATCACAATCACCTGAAGATTCAATCTTTACTAAAACCCAACATATTGGTGGGAAAAAGGGTGTTTTTCCGAGGTGCTCAATTGTGGGGTTTGGTCAAAATAATGAGACGGGTAGTTTCAAAATCAAGTCTTTGAAAAACCCTTTTGGTATTTCAGGGTTTTATGAAGGTGGTCAAGTACAACCCATATGCCATTATTATGGTACAGCTGCTGAAGCTATAGTGACAGCTTCATCAGAAGAAGATGAAGAAATGAGGGAACTAATGGAGGTTATTTGCAAACAAGAGAGTCAAAAAAAGATTCCATCTTTATTACAATCAAAAGAGCCTAAATTGATATGTGGGATGCCTCAAGGGAAGTACCATGCTCTTAGGAAGAGACAAGTGAAGATAGAGACTGAAGCTTGGGATGAAGCTGCTAAGGAGTATCAAGAGTTATTGGCTGATATGTGTGAGCAAAAGCTTGCCCCTAATTTGCCTTACATGAAGTCTTTGTTCTTGGGTTGGTTTGAGCCTTTACGGGATGCTATTAAGGCTGAACAAGATTTGTGTAAAGTGGGTAAGAATAGAGGTGCTTATGCTCCTCACTTTGATCATTTGCCAGCTGATATGATGGCTGTTATTACTATGCATAAGTTGATGGGTTTGTTGATGACTGGTAGTGGTAATGGTAGTGCCACTGTTGTCCAAGCTGCTCTCCAAATTGGTGAAGCCATTGAACATGAGGCTAGAATTCAGAGATTCTTGGAAAAACCAAAGAAAAAAACCCCACCAAACAGCATCAATGAGGATGATGCAACAAAAGCACAAGAGAGACTTAGGAAAAAGGTCACCAATTTGATGAAGAAGCAAAAAGTTCACCAGATCAGAGAAATAGTGAAGGGCCATGGTGATTCAAAGCCTTGGGGCCAGGACAATCAAGTCAAGGTTGGCTGCAGATTAATTCAATTACTGATGGAAACGGCATACATACAACCTCCAGCAAGTCAGATAGGCGATGGTCCACCTGATATTCGTCCTGCATTCATACACACCCAGAAAACTGTTATTAGAGAGGCACAAAAAGGAAGCAGAAGATATGGAGTTATAGAATGCGATCCTTTGGTACGGAAAGGTTTAGAAAGAACAGCTAGGCACATGGTGATTCCTTATATGCCAATGTTGGTTCCTCCACTGAAATGGACAGGGTATGATAAAGGAGCACATTTTTTCCTTCCATCTTACATCATGCGAACGCATGGAGCTAGGCAGCAGAGAGATGCACTGAAAAGGGTTCCAAAGCAGCAGTTAGAAACTGTATTTGAGGCTCTTGACACGTTGGGAAACACTAAATGGAGGATCAATAAAAGGGTTCTCAGTACCATAGACAGGATATGGGCTAGTGGAGGCCGCCTTGCTGACTTAGTTGACCGTGAAGATATCCCTTTACCCGAGGAACCAGATACAGATGATGCATCAGAAATTAGAAAGTGGAAGTGGAAAGTTAAAGGTGTCAAGAAAGAAAATGCAGAACGGCATTCACAGCGTTGTGATATAGAACTCAAACTAGCTGTGGCAAGAAAAATGAAGGATGAGGAGGGATTTTACTATCCACACAACCTGGATTTTCGTGGTCGTGCATACCCCATGCACCCTCATTTAAATCATCTTGGCTCTGACTTGTGCCGAGGAATTCTGGAGTTTGCAGAGGGCCGTCCTCTTGGAAAGTCAGGGCTCCGCTGGCTAAAAATACATTTGGCAAATTTATATGCTGGCGGTGTTGATAAGTTGTCCTATGAGGGTAGAATAGCGTTTACTGAGAATCATCTCGATGACATTTTTGATTCTGCGGATAGACCTCTGGAAGGAAGACGGTGGTGGTTGGATGCAGAGGATCCTTTCCAGTGCTTGGCAGCATGTATGAATCTTGCTGAAGCACTGAGAAGCTCATCTCCAGAGGATTATGTTTCACATATGCCTGTTCATCAGGATGGTTCATGTAATGGATTACAACATTATGCTGCATTGGGAAGAGACAAGCTGGGAGCAGAGGCTGTGAATCTTGTTGCAGGAGATAAACTCGCAGATGTATATTCTGGCATTGCTTCTCGAGTTCTTGAAATCATGCGCCAAGATGCACAAAAAGATCCCGCAACTGAACCTCAGGCACTTCGTGCAAAGCTTTTACTTAATCAGGTGGACAGGAAGCTGGTCAAGCAGACTGTAATGACATCAGTTTATGGTGTCACCTATGTTGGGGCACGTGATCAAATTAAAAGGAGATTGAAAGAACGTGATGCCATTGCAGATGATAATGAGTTGTTTGCAGCATCTTGCTATGCAGCTAAAACAACCATGACAGCACTGGGAGAAATGTTTGAAGCAGCACGAAGCATCATGAGTTGGCTTGGAGAATGTGCGAAGATCATAGCGTCGGAAAACCAGCCAGTGCGGTGGACCACACCTCTTGGCCTCCCTGTTGTTCAACCTTACCGGAATCTTGGCAGACGTCTTATCAAGACATCTCTTCAGGTTTTGACACTAAGGCATGAAACTGATAAGATCATGGTAAAGCGGCAGAGAACAGCTTTTCCTCCTAATTTTGTCCATTCTCTCGATGGTTCCCATATGATGATGACTGCCATTGCCTGCAAACGAGCGGGTTTTAATTTTGCCGGAGTTCATGATTCATATTGGACGCATGCAAGTGATGTTGATGAAATGAACAGAATATTAAGGGAGAAGTTCGTTGAGCTATATGAACTACCTATACTGGAGAATTTGTTGGAGAGCTTTGAGACATCATTCCCAAATCTACAGTTTCCTCCGCTTCCTGAGCGTGGAGACTTCAACTTACGAGAGGTTCTGGAGTCCCCATACTTCTTCAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_107215.p1 GENE.R_Transcript_107215~~R_Transcript_107215.p1 ORF type:complete len:983 (+),score=225.25,RNA_pol|PF00940.15|2.1e+03,RNA_pol|PF00940.15|2.9e-162,RPOL_N|PF14700.2|3.9e-83 R_Transcript_107215:173-3121(+)
MWRKAFKLDTLRKLKPSSNLTRPKQSQSQSPEDSIFTKTQHIGGKKGVFPRCSIVGFGQNNETGSFKIKSLKNPFGISGFYEGGQVQPICHYYGTAAEAIVTASSEEDEEMRELMEVICKQESQKKIPSLLQSKEPKLICGMPQGKYHALRKRQVKIETEAWDEAAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDAIKAEQDLCKVGKNRGAYAPHFDHLPADMMAVITMHKLMGLLMTGSGNGSATVVQAALQIGEAIEHEARIQRFLEKPKKKTPPNSINEDDATKAQERLRKKVTNLMKKQKVHQIREIVKGHGDSKPWGQDNQVKVGCRLIQLLMETAYIQPPASQIGDGPPDIRPAFIHTQKTVIREAQKGSRRYGVIECDPLVRKGLERTARHMVIPYMPMLVPPLKWTGYDKGAHFFLPSYIMRTHGARQQRDALKRVPKQQLETVFEALDTLGNTKWRINKRVLSTIDRIWASGGRLADLVDREDIPLPEEPDTDDASEIRKWKWKVKGVKKENAERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRPLEGRRWWLDAEDPFQCLAACMNLAEALRSSSPEDYVSHMPVHQDGSCNGLQHYAALGRDKLGAEAVNLVAGDKLADVYSGIASRVLEIMRQDAQKDPATEPQALRAKLLLNQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERDAIADDNELFAASCYAAKTTMTALGEMFEAARSIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRNLGRRLIKTSLQVLTLRHETDKIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKRAGFNFAGVHDSYWTHASDVDEMNRILREKFVELYELPILENLLESFETSFPNLQFPPLPERGDFNLREVLESPYFFN*

Click here to download the sequence:
Link to NCBI Protein BLAST