Transcript Information: R_Transcript_107268.p1


Annotated TAIR IDAT5G09280.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2880423-2881597 | Reverse length=297
E-Value1.5E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.28667797232289
Replicate 31.0472083050223
Condition 3: 24 Hour
Replicate 10.58866172378728
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_107268.p1 GENE.R_Transcript_107268~~R_Transcript_107268.p1 ORF type:complete len:156 (-),score=15.48 R_Transcript_107268:922-1389(-)
ATGACTACTCAGATTCTCTCAGCACTCTTTCTTTCCATTCTGCTAGCCATAGCGCCAAACAGCAGTTTGGCTAAGAAAACTGGCCTTGCAAAATGGAATGCCATTGATGTCTGCTGGCGTGGGAACACTAACTGGGCATCGCAAAGGCAAGAGCTAGCGCGATGCTCAGCAGGTTACGTAGGGAAGATGACTAACAATGTCGGAAAGGATGTAACGAAATATGTCGTCACAGATCCTAGTGATGATGCCGTGAATCCTAAGCCTGGGACTCTTCGTTATGGAGTCACCAAGATTCCTGGAAAGGTATGGATCACATTCCAAAAGGACATGAACATCAACCTCGCGAGGACCCTTGTTATTGGAAACTTTACAACCATTGACGGCCGAGGTGCTAGTGTTCACATCTCTAAGGGTGGTTGCCTCTTGCTCCATAAGGTACTACATTGGCATGCTTTGACAAACAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_107268.p1 GENE.R_Transcript_107268~~R_Transcript_107268.p1 ORF type:complete len:156 (-),score=15.48 R_Transcript_107268:922-1389(-)
MTTQILSALFLSILLAIAPNSSLAKKTGLAKWNAIDVCWRGNTNWASQRQELARCSAGYVGKMTNNVGKDVTKYVVTDPSDDAVNPKPGTLRYGVTKIPGKVWITFQKDMNINLARTLVIGNFTTIDGRGASVHISKGGCLLLHKVLHWHALTNN*

Click here to download the sequence:
Link to NCBI Protein BLAST