Transcript Information: R_Transcript_107268.p3


Annotated TAIR IDAT5G09280.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2880423-2881597 | Reverse length=297
E-Value1.5E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.50237507214822
Replicate 20
Replicate 30.210153555928
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.33305707560343
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_107268.p3 GENE.R_Transcript_107268~~R_Transcript_107268.p3 ORF type:complete len:109 (-),score=16.92,Pec_lyase_C|PF00544.15|5.1e-14 R_Transcript_107268:448-774(-)
ATGGGACCTGGTTCCAAGCTGATTGAACTCAGCGAGATGGATGGTGATGCCATTAGGATGATTGCATCCAAAAAGGTTTGGATAGACCACAACACCTTATATAAATCCGAGGATGGCCTCATAGATGTAACCCTTGGTTCAACCAACATCACCATCTCAAATAACTGGTTCAGGGACCATGACAAGGTCATGCTCCTCGGCCATGATGATGCATTCAAAGCTGATAGGGACATGAAGGTCACAGTTGTATACAACCGTTTTGGCCCTAACTGCAACCAGCGTATGCCAAGGTCTGCTTCCCATTCTCGCATAATCTCACTAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_107268.p3 GENE.R_Transcript_107268~~R_Transcript_107268.p3 ORF type:complete len:109 (-),score=16.92,Pec_lyase_C|PF00544.15|5.1e-14 R_Transcript_107268:448-774(-)
MGPGSKLIELSEMDGDAIRMIASKKVWIDHNTLYKSEDGLIDVTLGSTNITISNNWFRDHDKVMLLGHDDAFKADRDMKVTVVYNRFGPNCNQRMPRSASHSRIISLI*

Click here to download the sequence:
Link to NCBI Protein BLAST