Transcript Information: R_Transcript_107380.p1


Annotated TAIR IDAT1G78915.3
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29667729-29671081 | Reverse length=405
E-Value7.7E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.8569219822475
Replicate 26.2014389415226
Replicate 37.6355791987175
Condition 2: 8 Hour
Replicate 15.5790578360812
Replicate 25.755332457014
Replicate 36.12712594781
Condition 3: 24 Hour
Replicate 17.0713920996726
Replicate 27.8170537840021
Replicate 37.9423738526294


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_107380.p1 GENE.R_Transcript_107380~~R_Transcript_107380.p1 ORF type:complete len:237 (+),score=58.82,TPR_16|PF13432.2|3.2e-07,TPR_16|PF13432.2|11,TPR_16|PF13432.2|0.25,TPR_11|PF13414.2|0.00069,TPR_11|PF13414.2|97,TPR_11|PF13414.2|0.025,TPR_19|PF14559.2|0.067,TPR_19|PF14559.2|0.0041,TPR_19|PF14559.2|0.15,TPR_19|PF14559.2|5.8,TPR_19|PF14559.2|15,TPR_12|PF13424.2|2.9,TPR_12|PF13424.2|0.093,TPR_12|PF13424.2|0.32,TPR_8|PF13181.2|2.3e+02,TPR_8|PF13181.2|0.24,TPR_8|PF13181.2|3e+03,TPR_8|PF13181.2|0.092,TPR_8|PF13181.2|7e+02,TPR_14|PF13428.2|1.9,TPR_14|PF13428.2|1.5e+02,TPR_14|PF13428.2|4.4,TPR_14|PF13428.2|16,TPR_14|PF13428.2|27,TPR_6|PF13174.2|12,TPR_6|PF13174.2|1.1e+02,TPR_6|PF13174.2|2.1e+03,TPR_6|PF13174.2|0.19,TPR_2|PF07719.13|24,TPR_2|PF07719.13|1.9,TPR_2|PF07719.13|1.3e+02,TPR_2|PF07719.13|1.1e+02,TPR_2|PF07719.13|6.1e+02,TPR_17|PF13431.2|1.7e+03,TPR_17|PF13431.2|42,TPR_17|PF13431.2|1.5e+02,TPR_17|PF13431.2|8.9e+03,TPR_17|PF13431.2|0.039,ANAPC3|PF12895.3|0.004,ANAPC3|PF12895.3|13 R_Transcript_107380:108-818(+)
ATGGGTTTGCTACAAGTCGGGTTTGGGTTGTGTTTGAAGTCCTTTCTGCTAACATGTACACTTAGTTGCGACAACTGCTATCACGATCTATATGAAGTTATCTTGCAGGGAGCTGCAGTGACTCTAGCAGAACTTGGAGAATATACTCGGGCAGCAAGTTTCTTGGAGGATTTGGTAAAGGAGAAGTCAAGTGACCCAGATGTCTTTCGCCTGCTTGGGGAGGTAAAATATGAGCTCAAAGATTATGAAGCAAGTGCTGCAGCATACAAGAGTTCAGCAAAGGTGTCAAATACTATGGATTTTGAAGTTCTGCGTGGTCTTACAAATGCTTTGCTTGCTGCCAAGAAGCCTGATGAGGCTGTTCAGGTCCTTTTGGAGTCGCGTGAACGTCTCAATAAGGAAAAATCAAGTGATAGCAGCATGAAGACACAAAGCAGCATAACTGTTAATGATGCCCAGAGTTTGGACCCAATTCAAGTTGAACTGCTGCTTGGAAAAGCATACTCAGATTGGGGCCATATCAGTGATGCTGTATCTGTTTATGATCAATTAATATCTAGTCATCCAAATGACTTCCGAGGATACTTAGCTAAGGGTATATTATTGAAAGAAATTGGCAATGTGGGAGATGCTGAAAGGATGTTTATTCAAGCACGCTTCTTTGCCCCTGAGAAGGCAAAAGCACTTGTGGATCGTTTTTCTAGAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_107380.p1 GENE.R_Transcript_107380~~R_Transcript_107380.p1 ORF type:complete len:237 (+),score=58.82,TPR_16|PF13432.2|3.2e-07,TPR_16|PF13432.2|11,TPR_16|PF13432.2|0.25,TPR_11|PF13414.2|0.00069,TPR_11|PF13414.2|97,TPR_11|PF13414.2|0.025,TPR_19|PF14559.2|0.067,TPR_19|PF14559.2|0.0041,TPR_19|PF14559.2|0.15,TPR_19|PF14559.2|5.8,TPR_19|PF14559.2|15,TPR_12|PF13424.2|2.9,TPR_12|PF13424.2|0.093,TPR_12|PF13424.2|0.32,TPR_8|PF13181.2|2.3e+02,TPR_8|PF13181.2|0.24,TPR_8|PF13181.2|3e+03,TPR_8|PF13181.2|0.092,TPR_8|PF13181.2|7e+02,TPR_14|PF13428.2|1.9,TPR_14|PF13428.2|1.5e+02,TPR_14|PF13428.2|4.4,TPR_14|PF13428.2|16,TPR_14|PF13428.2|27,TPR_6|PF13174.2|12,TPR_6|PF13174.2|1.1e+02,TPR_6|PF13174.2|2.1e+03,TPR_6|PF13174.2|0.19,TPR_2|PF07719.13|24,TPR_2|PF07719.13|1.9,TPR_2|PF07719.13|1.3e+02,TPR_2|PF07719.13|1.1e+02,TPR_2|PF07719.13|6.1e+02,TPR_17|PF13431.2|1.7e+03,TPR_17|PF13431.2|42,TPR_17|PF13431.2|1.5e+02,TPR_17|PF13431.2|8.9e+03,TPR_17|PF13431.2|0.039,ANAPC3|PF12895.3|0.004,ANAPC3|PF12895.3|13 R_Transcript_107380:108-818(+)
MGLLQVGFGLCLKSFLLTCTLSCDNCYHDLYEVILQGAAVTLAELGEYTRAASFLEDLVKEKSSDPDVFRLLGEVKYELKDYEASAAAYKSSAKVSNTMDFEVLRGLTNALLAAKKPDEAVQVLLESRERLNKEKSSDSSMKTQSSITVNDAQSLDPIQVELLLGKAYSDWGHISDAVSVYDQLISSHPNDFRGYLAKGILLKEIGNVGDAERMFIQARFFAPEKAKALVDRFSRS*

Click here to download the sequence:
Link to NCBI Protein BLAST