Transcript Information: R_Transcript_107384.p1


Annotated TAIR IDAT1G78915.3
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29667729-29671081 | Reverse length=405
E-Value3E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41721053610786
Replicate 21.5597251737821
Replicate 33.6650780153844
Condition 2: 8 Hour
Replicate 13.3580614784793
Replicate 23.3221881592619
Replicate 34.2526630596335
Condition 3: 24 Hour
Replicate 14.853936385286
Replicate 22.8986911684759
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_107384.p1 GENE.R_Transcript_107384~~R_Transcript_107384.p1 ORF type:5prime_partial len:175 (+),score=48.07,TPR_16|PF13432.2|1.3e-08,TPR_16|PF13432.2|0.14,TPR_11|PF13414.2|0.0002,TPR_11|PF13414.2|0.014,TPR_8|PF13181.2|57,TPR_8|PF13181.2|0.25,TPR_8|PF13181.2|0.058,TPR_8|PF13181.2|4.5e+02,TPR_19|PF14559.2|0.00024,TPR_19|PF14559.2|3.3,TPR_19|PF14559.2|7.4,TPR_14|PF13428.2|0.041,TPR_14|PF13428.2|75,TPR_14|PF13428.2|9.4,TPR_14|PF13428.2|16,TPR_17|PF13431.2|1.8e+03,TPR_17|PF13431.2|1.3,TPR_17|PF13431.2|6.1e+03,TPR_17|PF13431.2|0.025,TPR_6|PF13174.2|5.5,TPR_6|PF13174.2|65,TPR_6|PF13174.2|0.12,TPR_12|PF13424.2|0.19,TPR_12|PF13424.2|0.18,TPR_2|PF07719.13|5.2,TPR_2|PF07719.13|1.7,TPR_2|PF07719.13|72,TPR_2|PF07719.13|3.6e+02 R_Transcript_107384:3-527(+)
GCTGCAGTGACTCTAGCAGAACTTGGAGAATATACTCGGGCAGCTAGTTTCCTGGAGGATTTGGTAAAGGAGAAGCCAAGTGACCCAGATGTCTTTCGCCTGCTTGGGGAGGTAAAATATGAGCTCAAAGATTATGAAGCAAGTGCTGCAGCATACAAGAGTTCAGCAAAGGCTGTTCAGGTCCTTTTGGAGTCGCGTGAACGTCTCAATAAGGAAAAATCAAGTGATAGCAGCATGAAGACACAAAGCAGCATAACTGTTAATGATGCCCAGAGTTTGGACCCAATTCAAGTTGAACTGCTGCTTGGAAAAGCATACTCAGATTGGGGCCATATCAGTGATGCTGTATCTGTTTATGATCAATTAATATCTAGTCATCCAAATGACTTCCGAGGATACTTAGCTAAGGGTATATTATTGAAAGAAATTGGCAATGTGGGAGATGCTGAAAGGATGTTTATTCAAGCACGCTTCTTTGCCCCTGAGAAGGCAAAAGCACTTGTGGATCGTTTTTCTAGAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_107384.p1 GENE.R_Transcript_107384~~R_Transcript_107384.p1 ORF type:5prime_partial len:175 (+),score=48.07,TPR_16|PF13432.2|1.3e-08,TPR_16|PF13432.2|0.14,TPR_11|PF13414.2|0.0002,TPR_11|PF13414.2|0.014,TPR_8|PF13181.2|57,TPR_8|PF13181.2|0.25,TPR_8|PF13181.2|0.058,TPR_8|PF13181.2|4.5e+02,TPR_19|PF14559.2|0.00024,TPR_19|PF14559.2|3.3,TPR_19|PF14559.2|7.4,TPR_14|PF13428.2|0.041,TPR_14|PF13428.2|75,TPR_14|PF13428.2|9.4,TPR_14|PF13428.2|16,TPR_17|PF13431.2|1.8e+03,TPR_17|PF13431.2|1.3,TPR_17|PF13431.2|6.1e+03,TPR_17|PF13431.2|0.025,TPR_6|PF13174.2|5.5,TPR_6|PF13174.2|65,TPR_6|PF13174.2|0.12,TPR_12|PF13424.2|0.19,TPR_12|PF13424.2|0.18,TPR_2|PF07719.13|5.2,TPR_2|PF07719.13|1.7,TPR_2|PF07719.13|72,TPR_2|PF07719.13|3.6e+02 R_Transcript_107384:3-527(+)
AAVTLAELGEYTRAASFLEDLVKEKPSDPDVFRLLGEVKYELKDYEASAAAYKSSAKAVQVLLESRERLNKEKSSDSSMKTQSSITVNDAQSLDPIQVELLLGKAYSDWGHISDAVSVYDQLISSHPNDFRGYLAKGILLKEIGNVGDAERMFIQARFFAPEKAKALVDRFSRS*

Click here to download the sequence:
Link to NCBI Protein BLAST