Transcript Information: R_Transcript_107426.p3


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4500618731166
Replicate 21.6909772147354
Replicate 31.8448379272069
Condition 2: 8 Hour
Replicate 11.6433466407547
Replicate 20.45021909747354
Replicate 32.4364578013942
Condition 3: 24 Hour
Replicate 12.1571094039453
Replicate 21.7762624609861
Replicate 34.2600230598659


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_107426.p3 GENE.R_Transcript_107426~~R_Transcript_107426.p3 ORF type:complete len:149 (+),score=26.31,RVT_1|PF00078.23|6.7e-22 R_Transcript_107426:2927-3373(+)
ATGTTAATTGAGTTGGGATTCCCTGCTAAATGTATTGGATGGATAATGGCTTGTGTCACTTCTGTTAGCTATGTTATTAATATTAATGGGGAACTACAAAAACCTTTTGAGGTTAGGAGGGGGCTACGACAAGGTGATCCTATCTCTCCTTTGTTATTTGTTATTGCTATGGAGTATTTATCTAGGTGCATGGTTGGCTTGAAAGAGGATAATACTTTCAAATTTCATCCTAAGTGCAAGAAGATTGGCTTAACCCATTTATGTTTTGCTGATGATCTGATGATTTTTGCTAAGGGAGAAGATCAATTAGTTACTCGAATTCATGATATGTTCCTTAAATTCTCCAAAGTCTCAGGGTTGCAAGCTAATTTGGGTAAGAGTTCTATTTTCTTTGGAGGAGTTGGTCAGCAAGCACAGGAGGAAATTTTAGCTAAAGTGGGATTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_107426.p3 GENE.R_Transcript_107426~~R_Transcript_107426.p3 ORF type:complete len:149 (+),score=26.31,RVT_1|PF00078.23|6.7e-22 R_Transcript_107426:2927-3373(+)
MLIELGFPAKCIGWIMACVTSVSYVININGELQKPFEVRRGLRQGDPISPLLFVIAMEYLSRCMVGLKEDNTFKFHPKCKKIGLTHLCFADDLMIFAKGEDQLVTRIHDMFLKFSKVSGLQANLGKSSIFFGGVGQQAQEEILAKVGF*

Click here to download the sequence:
Link to NCBI Protein BLAST