Transcript Information: R_Transcript_107426.p5


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value2E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4505369517563
Replicate 24.6658445369551
Replicate 36.3629826655979
Condition 2: 8 Hour
Replicate 13.5708553048066
Replicate 23.105678033498
Replicate 32.6471098821398
Condition 3: 24 Hour
Replicate 14.4640180720536
Replicate 24.2885225620567
Replicate 34.5599384764369


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_107426.p5 GENE.R_Transcript_107426~~R_Transcript_107426.p5 ORF type:complete len:144 (+),score=27.41,zf-RVT|PF13966.2|3.6e-11,zf-RVT|PF13966.2|3.1e+03 R_Transcript_107426:3925-4356(+)
ATGTTGTTGCAGAGACATCTTACTAAGGATAGGATGGCAAGTTGGGGCATTCAATGTGACCCTATTTGCATTCTGTGCAGGAAGGAGAATGAAAGCCATGAACACATATTGTTACAGTGTGATTTTTCTGATAGAGTATGGCAAGGTGTCTTGGCTAGTTTGCATTTACAGAAGAAAGGTAGTAGGAAGCCTCGGAGGTGGCAGCAAGGATTGCATTGGATGAGCTCGGATAGCAAAGGTAAAAGAGTAGAAGCTATTTTATTTATAGCTGTTGTGGCTGAAATATGGTATGCTTGTTGGATAGAAAGAAATCAAAGGGTATTTGCCAAGGTGGAGAAGACTGTTGATATGCTTATCAAGGAAGTTGTGTATGCTGTTTGTTTGAGAGGAAATAGTACACATTGCATCAAAGCTTACTTAGATAATTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_107426.p5 GENE.R_Transcript_107426~~R_Transcript_107426.p5 ORF type:complete len:144 (+),score=27.41,zf-RVT|PF13966.2|3.6e-11,zf-RVT|PF13966.2|3.1e+03 R_Transcript_107426:3925-4356(+)
MLLQRHLTKDRMASWGIQCDPICILCRKENESHEHILLQCDFSDRVWQGVLASLHLQKKGSRKPRRWQQGLHWMSSDSKGKRVEAILFIAVVAEIWYACWIERNQRVFAKVEKTVDMLIKEVVYAVCLRGNSTHCIKAYLDNL*

Click here to download the sequence:
Link to NCBI Protein BLAST