Transcript Information: R_Transcript_107435.p1


Annotated TAIR IDAT1G24130.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:8534183-8535430 | Reverse length=415
E-Value1E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5157268933715
Replicate 25.287576877454
Replicate 34.2565086975736
Condition 2: 8 Hour
Replicate 113.829424945755
Replicate 215.964248160455
Replicate 320.193112059355
Condition 3: 24 Hour
Replicate 13.6485512709065
Replicate 22.9658661099798
Replicate 33.5320012453184


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_107435.p1 GENE.R_Transcript_107435~~R_Transcript_107435.p1 ORF type:complete len:409 (+),score=63.52,WD40|PF00400.28|0.055,WD40|PF00400.28|12,WD40|PF00400.28|1.2e+04,WD40|PF00400.28|0.005,WD40|PF00400.28|0.00021,WD40|PF00400.28|0.00058,WD40|PF00400.28|2.5e-05,WD40|PF00400.28|0.017,Nucleoporin_N|PF08801.7|0.071,Nucleoporin_N|PF08801.7|1.9,Nucleoporin_N|PF08801.7|2.9e+02,Nucleoporin_N|PF08801.7|1.5e+02 R_Transcript_107435:277-1503(+)
ATGCAGAATGTAATATGTTATCCACCTTCTAGCTCAAATGAAGCTGTTGAGATTGACAAACGTGGTTTGCGCTCAGCATCCTTCTCCTCTCAAATCAGTCTCCCAAGAGTTCCTGTCCTTACAGCACAGAGTAACCAGCAAAGTCATCTTTCTAGTACGCACAGCTACTGCATAGCCACTCTCACAGGTCATACCTCCTATATATTCTCTCTCACGTTAGCTGGGAAATATCTCTACTCCGGCTCCTTGGACAATGAAATCCGAGCATGGAAACGCAACCCACACAACTATGAAGCTGGTGATGAGAGCCTTGCTGATAATGTGGTGGCTCTGACAAAAGGTGCAGTGAAGTCCCTGGTAGTCCTAGCTAACAATCTCTTCAGTGCACACCAAGACTGTAAAATTCGTGTTTGGAAAATAAAAGACCAAGAGCCACATAAAACCCAAAAATGTGAACAAATGGCTACCCTACCCACACTTAGTGACCGTACTGTCAAATTTCTGAACCCAAATAATCAAGTTCAAATTAGACGGCACAAGAAGTGCACTTGGGTTCATCATGTCGATACTGTCTCTGCACTTGCCTTATCAAGGGACGAGTCCCTTCTCTATTCTGTTTCTTGGGACCGGACCCTAAAAGTTTGGCGAACATCTGACTTCAAATGCTTGGAGTCAGTTAGTAATGCACATGATGATGCTATAAATGCAGTTGCAGTGTCTAACAGTGGTGATGTTTACACAGGATCAGCAGATAAGAAAATCAAAGTGTGGCAAAAACTCTGCGGAGACAACAAGCATACTGCAGTTTGCACTTTGGAGATGCATAATTCTGGTATTAATGCATTGGCACTAAGTCCCGATGGATCATTGTTGTACTCCGGTGCATGTGATAGATCGATATTAGTGTGGGAAAAGAGAGCTCATGAAGATGGCATGGAACTTTTGGGAGCCCTAAGGGGCCATACCAAAGCTATATTGTGCTTGGCCACGGTGGATGATTTGCTTTTTAGCGGTTCAGCTGATAAGACCATCAGGGTTTGGAGAAGGATAGGGGGAAGCTATTGTTGTTCAGCAGTACTGGAAGGACATCAGGGCCCAGTCAAGTGCCTGACAGCAGCAGTTGATCCTTATGGCACACAAGAAAGTGTGCCGTCATCTTGTTATCTTCTTTACAGTGGTAGCTTAGATTGTGACATTCAAGTGTGGCATGTAATAGTTCCTCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_107435.p1 GENE.R_Transcript_107435~~R_Transcript_107435.p1 ORF type:complete len:409 (+),score=63.52,WD40|PF00400.28|0.055,WD40|PF00400.28|12,WD40|PF00400.28|1.2e+04,WD40|PF00400.28|0.005,WD40|PF00400.28|0.00021,WD40|PF00400.28|0.00058,WD40|PF00400.28|2.5e-05,WD40|PF00400.28|0.017,Nucleoporin_N|PF08801.7|0.071,Nucleoporin_N|PF08801.7|1.9,Nucleoporin_N|PF08801.7|2.9e+02,Nucleoporin_N|PF08801.7|1.5e+02 R_Transcript_107435:277-1503(+)
MQNVICYPPSSSNEAVEIDKRGLRSASFSSQISLPRVPVLTAQSNQQSHLSSTHSYCIATLTGHTSYIFSLTLAGKYLYSGSLDNEIRAWKRNPHNYEAGDESLADNVVALTKGAVKSLVVLANNLFSAHQDCKIRVWKIKDQEPHKTQKCEQMATLPTLSDRTVKFLNPNNQVQIRRHKKCTWVHHVDTVSALALSRDESLLYSVSWDRTLKVWRTSDFKCLESVSNAHDDAINAVAVSNSGDVYTGSADKKIKVWQKLCGDNKHTAVCTLEMHNSGINALALSPDGSLLYSGACDRSILVWEKRAHEDGMELLGALRGHTKAILCLATVDDLLFSGSADKTIRVWRRIGGSYCCSAVLEGHQGPVKCLTAAVDPYGTQESVPSSCYLLYSGSLDCDIQVWHVIVPQ*

Click here to download the sequence:
Link to NCBI Protein BLAST