Transcript Information: R_Transcript_107578.p1


Annotated TAIR IDAT4G12350.1
Annotated Gene Namemyb domain protein 42
Annotated Gene Symbol(s)MYB42, AtMYB42
Annotation TypeOrtholog
Chromosome Positionchr4:7324912-7326636 | Forward length=286
E-Value3.6E-95
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.224283966475
Replicate 20.2560524441012
Replicate 31.1174018339587
Condition 2: 8 Hour
Replicate 11.3437364910074
Replicate 21.2271215644553
Replicate 30.22136110512667
Condition 3: 24 Hour
Replicate 11.5398529238094
Replicate 20.26896657183631
Replicate 31.2011545255005


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_107578.p1 GENE.R_Transcript_107578~~R_Transcript_107578.p1 ORF type:internal len:164 (-),score=27.45,Myb_DNA-binding|PF00249.27|4.5e-15,Myb_DNA-binding|PF00249.27|8.7e-15,Myb_DNA-bind_6|PF13921.2|1.8e-10,Myb_DNA-bind_6|PF13921.2|8.6e-07 R_Transcript_107578:2-490(-)
GGAAGACAACCTTGTTGTGACAAACTAGGCGTAAAGAAGGGCCCTTGGACGGCTGAGGAAGACAAGAAGCTTATCAATTTCATCCTCACCAATGGCCAATGTTGTTGGAGGGCTGTCCCTAAGCTTGCCGGCCTCCGCCGTTGCGGTAAGAGTTGTCGACTCCGGTGGACTAATTATCTCCGGCCAGACTTGAAGCGAGGCCTTCTAAGTGATGCTGAAGAGCAATTGGTCATTGATCTCCATGCTCGTCTTGGCAACAGGTGGTCCAAAATAGCTGCACGATTGCCGGGGAGGACTGACAATGAGATCAAGAATCATTGGAACACCCACATCAAGAAGAAACTTATTAAGATGGGCATTGATCCTGTCACCCATGAACCCTTGAATAAGCAATCCACCACTCTTGATGATGATAATAATAATAATAATAGTAACAATAATAAATCCCAAAACCAATCTTCTTCATCCTCTAATAATAACAATAATTCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_107578.p1 GENE.R_Transcript_107578~~R_Transcript_107578.p1 ORF type:internal len:164 (-),score=27.45,Myb_DNA-binding|PF00249.27|4.5e-15,Myb_DNA-binding|PF00249.27|8.7e-15,Myb_DNA-bind_6|PF13921.2|1.8e-10,Myb_DNA-bind_6|PF13921.2|8.6e-07 R_Transcript_107578:2-490(-)
GRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLSDAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMGIDPVTHEPLNKQSTTLDDDNNNNNSNNNKSQNQSSSSSNNNNNS

Click here to download the sequence:
Link to NCBI Protein BLAST