Transcript Information: R_Transcript_107784.p3


Annotated TAIR IDAT4G12680.1
Annotated Gene Nameunknown protein; INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40640.1); Has 103 Blast hits to 103 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:7475104-7478174 | Forward length=575
E-Value6E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.92811665871451
Replicate 20.53380424787198
Replicate 30.97062447441324
Condition 2: 8 Hour
Replicate 10
Replicate 21.1369939919247
Replicate 30.30765441729469
Condition 3: 24 Hour
Replicate 10.97278844185187
Replicate 20.37381794729792
Replicate 30.55646706831095


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_107784.p3 GENE.R_Transcript_107784~~R_Transcript_107784.p3 ORF type:complete len:118 (+),score=15.66 R_Transcript_107784:1257-1610(+)
ATGCTGGTATGGGACAGTTTCTTCAAAGGGTGTGAGAATGTTGGGAAAGATCTTCTAGAGAAGGGAGCTATAACAACTACCGACCTCATTGCATGGCAACAATCTAAGAACCACAGGATAGTCAATATAGGAATCCCTGCATGTGTATTCCTGGATTGCTTCCTCCACTCTATTAAGAGTGGCTCGAAAGGGTTTCTGTTGAGTAACAATATCGAGGTAACCAGTGTGAATAGGCCTGAAGTTGTGATACAGCACGGATGGAGGCTTGGGACAATGGTGGTGTGCCTCCACATGAAGAAATCAGAAGAGCTCAGTTGGAGGGTATTTGTAGAAGGTTGCAGGGCTTCTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_107784.p3 GENE.R_Transcript_107784~~R_Transcript_107784.p3 ORF type:complete len:118 (+),score=15.66 R_Transcript_107784:1257-1610(+)
MLVWDSFFKGCENVGKDLLEKGAITTTDLIAWQQSKNHRIVNIGIPACVFLDCFLHSIKSGSKGFLLSNNIEVTSVNRPEVVIQHGWRLGTMVVCLHMKKSEELSWRVFVEGCRASV*

Click here to download the sequence:
Link to NCBI Protein BLAST