Transcript Information: R_Transcript_107874.p1


Annotated TAIR IDAT1G08540.1
Annotated Gene NameRNApolymerase sigma subunit 2
Annotated Gene Symbol(s)SIGB, SIG1, SIG2, SIGA, ATSIG1, ABC1, ATSIG2
Annotation TypeOrtholog
Chromosome Positionchr1:2703461-2706696 | Forward length=572
E-Value4.7E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2816201193398
Replicate 21.1929716145624
Replicate 31.5618230179195
Condition 2: 8 Hour
Replicate 11.1129938612384
Replicate 22.0328074401078
Replicate 33.5065611425748
Condition 3: 24 Hour
Replicate 12.3479575573788
Replicate 21.5037676516303
Replicate 33.979582670345


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_107874.p1 GENE.R_Transcript_107874~~R_Transcript_107874.p1 ORF type:complete len:88 (+),score=10.50,Sigma70_r2|PF04542.10|2.4e-15 R_Transcript_107874:83-346(+)
ATGATCAAAAGCAACATAGGACTTGTTATATCCATTGCCAAAAATTATCAAGGAGCTGGAATGAACCTTCAGGATCTTATTCAGGAAGGATGTCGAGGCTTGGTCAGGACCGCAGAAAAGTCTGATGCTTCCAAAGGTTATAAGTTCTCAACTTTTGCTCACTGGTGGAAGAAACAAGCAGTTCGGAAATCTCTTTCCGATCAATCCAGGACTATCCGGTTACCGCGTAATCTACTTATTATCAATGCACTTTCACATGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_107874.p1 GENE.R_Transcript_107874~~R_Transcript_107874.p1 ORF type:complete len:88 (+),score=10.50,Sigma70_r2|PF04542.10|2.4e-15 R_Transcript_107874:83-346(+)
MIKSNIGLVISIAKNYQGAGMNLQDLIQEGCRGLVRTAEKSDASKGYKFSTFAHWWKKQAVRKSLSDQSRTIRLPRNLLIINALSHG*

Click here to download the sequence:
Link to NCBI Protein BLAST