Transcript Information: R_Transcript_10789.p1


Annotated TAIR IDAT2G15680.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:6831024-6831587 | Forward length=187
E-Value8E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.694096764641
Replicate 233.767246030335
Replicate 332.352814955391
Condition 2: 8 Hour
Replicate 159.321425387656
Replicate 263.278990365005
Replicate 381.30798777895
Condition 3: 24 Hour
Replicate 123.904520927816
Replicate 228.535412275953
Replicate 329.67250686935


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_10789.p1 GENE.R_Transcript_10789~~R_Transcript_10789.p1 ORF type:complete len:194 (+),score=37.90,EF-hand_1|PF00036.28|5.3e-08,EF-hand_1|PF00036.28|7.8e-06,EF-hand_1|PF00036.28|2.1e-08,EF-hand_1|PF00036.28|2.6e-07,EF-hand_5|PF13202.2|8.3e-08,EF-hand_5|PF13202.2|1.5e-05,EF-hand_5|PF13202.2|4.8e-08,EF-hand_5|PF13202.2|0.00027,EF-hand_7|PF13499.2|3.1e-11,EF-hand_7|PF13499.2|1.1e-13,EF-hand_6|PF13405.2|2.8e-06,EF-hand_6|PF13405.2|0.0022,EF-hand_6|PF13405.2|3.3e-07,EF-hand_6|PF13405.2|0.0021,EF-hand_8|PF13833.2|0.00015,EF-hand_8|PF13833.2|0.037,EF-hand_8|PF13833.2|0.00046,EF-hand_8|PF13833.2|0.00015,SPARC_Ca_bdg|PF10591.5|9.1e-05,SPARC_Ca_bdg|PF10591.5|0.00091,EF-hand_9|PF14658.2|32,EF-hand_9|PF14658.2|5.6e-06,EF-hand_4|PF12763.3|70,EF-hand_4|PF12763.3|1.2,EF-hand_4|PF12763.3|0.04 R_Transcript_10789:304-885(+)
ATGTCAAACTTGAGTTTTCTCAAGGCTCAAGGCCTTAACCTCTCTCGAAAATCCTCCCTCGCCAATCCACCCCAAAGTAACACCTCAAGGTTCTCCATGAGACAAAAGACCAACACCAACAAGTCCAAAAGCTTCCAACCAAACATAGAAGAGATGAAGACGGTTTTTGACAAGTATGACACCAACAAGGACGGAAAGATCTCTAGGGAGGAGTATAAGTCCATGGTGAGGGCCATGAACGGGAAAGGTATAATAGTTAACACTGAAGCCGAAACCACAAAGGCATTCCAAGTCGCTGATAAGGATGCAGATGGGTTTGTCGATTTTAAAGAGTTCATGGAATTGCACAATAACAAGGTTAAGGTCAAGGACATTGAAAATGCATTTCGGGTGTTTGATTCCAATGGCGATGGGAAAATAAGTGCTAGCGAGCTCATGGAAGTGCTTCGGAGGATGGGAGAAAGGTATAGCTTGGAATCATGTAAGAAGATGATTAAAGAGGTTGACAACGATGGGGATGGCTTGATTGATATGGATGAGTTTAATACCATGATGACTCGCACTATGAAGTTGGCTAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_10789.p1 GENE.R_Transcript_10789~~R_Transcript_10789.p1 ORF type:complete len:194 (+),score=37.90,EF-hand_1|PF00036.28|5.3e-08,EF-hand_1|PF00036.28|7.8e-06,EF-hand_1|PF00036.28|2.1e-08,EF-hand_1|PF00036.28|2.6e-07,EF-hand_5|PF13202.2|8.3e-08,EF-hand_5|PF13202.2|1.5e-05,EF-hand_5|PF13202.2|4.8e-08,EF-hand_5|PF13202.2|0.00027,EF-hand_7|PF13499.2|3.1e-11,EF-hand_7|PF13499.2|1.1e-13,EF-hand_6|PF13405.2|2.8e-06,EF-hand_6|PF13405.2|0.0022,EF-hand_6|PF13405.2|3.3e-07,EF-hand_6|PF13405.2|0.0021,EF-hand_8|PF13833.2|0.00015,EF-hand_8|PF13833.2|0.037,EF-hand_8|PF13833.2|0.00046,EF-hand_8|PF13833.2|0.00015,SPARC_Ca_bdg|PF10591.5|9.1e-05,SPARC_Ca_bdg|PF10591.5|0.00091,EF-hand_9|PF14658.2|32,EF-hand_9|PF14658.2|5.6e-06,EF-hand_4|PF12763.3|70,EF-hand_4|PF12763.3|1.2,EF-hand_4|PF12763.3|0.04 R_Transcript_10789:304-885(+)
MSNLSFLKAQGLNLSRKSSLANPPQSNTSRFSMRQKTNTNKSKSFQPNIEEMKTVFDKYDTNKDGKISREEYKSMVRAMNGKGIIVNTEAETTKAFQVADKDADGFVDFKEFMELHNNKVKVKDIENAFRVFDSNGDGKISASELMEVLRRMGERYSLESCKKMIKEVDNDGDGLIDMDEFNTMMTRTMKLAN*

Click here to download the sequence:
Link to NCBI Protein BLAST