Transcript Information: R_Transcript_107919.p1


Annotated TAIR IDAT1G54140.1
Annotated Gene NameTATA binding protein associated factor 21kDa subunit
Annotated Gene Symbol(s)TAFII21, TAF9
Annotation TypeOrtholog
Chromosome Positionchr1:20214076-20214869 | Reverse length=183
E-Value3.5E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0082160710426
Replicate 27.718007662908
Replicate 36.2472920716779
Condition 2: 8 Hour
Replicate 19.8717716388103
Replicate 211.136249454503
Replicate 39.1116780584551
Condition 3: 24 Hour
Replicate 18.3482935373469
Replicate 26.3637703518267
Replicate 36.4884500059972


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_107919.p1 GENE.R_Transcript_107919~~R_Transcript_107919.p1 ORF type:5prime_partial len:253 (+),score=37.59,TFIID-31kDa|PF02291.11|1.4e-45,CENP-S|PF15630.2|4.2e-06 R_Transcript_107919:2-760(+)
TACATGCTATACTCGATGTCAAAACACCCCAGCTACCGCAAAAGCCTTCAAATTCAATCTCTCTCTCCTTCGCTTCTCTCTCTCAGAATCTGTCCTTCACCGGCCATCGAACGTTGGACGTTCCCCAGTACCCAGGCCCCGCCCTACGTCCGGTCTCGGCATCCCACGGTCCGGCTTCTCAGTCTTCACGAATCAGGACCACGACCACCAGGACCTCAGGGTAGAAGGGTGATGGCAGGAGGAGAAGAAGACTTGCCCCGGGATGCCAAGATTGTGAAATCATTGTTAAAGTCAATGGGTGTAGAGGAGTATGAACCTCGTGTTGTGCACCAGTTTCTGGAGCTTTGGTATCGATATGTTGTTGATGTATTGACGGATGCACAAGTCTACTCAGAGCATGCTGGCAAAGGCACAATCGACTGTGATGATATTAAGCTTGCAATTCAATCGAAAGTGAATTTCAGCTTCTCACAACCACCTCCTCGTGAGGTCCTACTAGAGCTGGCTAGAAACAGGAATAAAACTCCATTGCCGAAGAGTCTTGGAGGCCCCGGGATACCCCTTCCACCTGAAGAAGACACGCTGATCAGCCCGAACTACCAACTTGTGATACCAAAGAAGCAGGCACCCCAGGCAATGGAAGAAACCGAGGAAGAAGAGGCTTCTGCCCCTAGCTCGTCCCAAGAGCCAAAGGGTGATTTGGGCCAACATACTCCACAGAGGGTTTCTTTCCCTCTTGGAGCAAAGCGTCCCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_107919.p1 GENE.R_Transcript_107919~~R_Transcript_107919.p1 ORF type:5prime_partial len:253 (+),score=37.59,TFIID-31kDa|PF02291.11|1.4e-45,CENP-S|PF15630.2|4.2e-06 R_Transcript_107919:2-760(+)
YMLYSMSKHPSYRKSLQIQSLSPSLLSLRICPSPAIERWTFPSTQAPPYVRSRHPTVRLLSLHESGPRPPGPQGRRVMAGGEEDLPRDAKIVKSLLKSMGVEEYEPRVVHQFLELWYRYVVDVLTDAQVYSEHAGKGTIDCDDIKLAIQSKVNFSFSQPPPREVLLELARNRNKTPLPKSLGGPGIPLPPEEDTLISPNYQLVIPKKQAPQAMEETEEEEASAPSSSQEPKGDLGQHTPQRVSFPLGAKRPK*

Click here to download the sequence:
Link to NCBI Protein BLAST