Transcript Information: R_Transcript_107920.p1


Annotated TAIR IDAT1G54140.1
Annotated Gene NameTATA binding protein associated factor 21kDa subunit
Annotated Gene Symbol(s)TAFII21, TAF9
Annotation TypeOrtholog
Chromosome Positionchr1:20214076-20214869 | Reverse length=183
E-Value1.7E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.603646138148
Replicate 216.514876612029
Replicate 322.272954342504
Condition 2: 8 Hour
Replicate 119.45319705295
Replicate 218.648798689684
Replicate 321.451903460457
Condition 3: 24 Hour
Replicate 125.135622933099
Replicate 221.27068446364
Replicate 320.070938685218


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_107920.p1 GENE.R_Transcript_107920~~R_Transcript_107920.p1 ORF type:5prime_partial len:253 (+),score=38.59,TFIID-31kDa|PF02291.11|1.4e-45,CENP-S|PF15630.2|4.2e-06 R_Transcript_107920:3-761(+)
ACATGCTATACTCGATGTCAAAACACCCCAGCTACCGCAAAAGCCTTCAAATTCAATCTCTCTCTCCTTCGCTTCTCTCTCTCAGACTCTCTCCTTCACTGGCCATCGAGCGGTCGGACGTTCCCCAGTCCCCAGGCCCTGCCCTACGTCCGGTCTCGGCGTCCCACGGTCCGGCTGCTCAGTCTTCACGAATCAGGACCACGACCATCAGGACCTCAGATTAGAAGGGTGATGGCAGAAGGAGAAGAAGACTTGCCCCGGGATGCCAAGATTGTGAAATCATTGTTAAAGTCAATGGGTGTAGAGGAGTATGAACCTCGTGTTGTGCACCAGTTTCTGGAGCTTTGGTATCGATATGTTGTTGATGTATTGACGGATGCACAAGTCTACTCAGAGCATGCTGGCAAAGGCACAATCGACTGTGATGATATTAAGCTTGCAATTCAATCGAAAGTGAATTTCAGCTTCTCACAACCACCTCCTCGTGAGGTCCTACTAGAGCTGGCTAGAAACAGGAATAAAACTCCATTGCCGAAGAGTCTTGGAGGCCCCGGGATACCCCTTCCACCTGAAGAAGACACGTTGATCAGCCCGAACTACCAGCTTGTGATACCAAAGAAGCAGCCACCCCAGGCAACGGAAGAAACCGAGGAAGAAGAGGCTTCTGCCCCTAGCTCGTCCCAAGAGCCAAAGGGTGATTTGGGCCAACATACTCCACAGAGGGTTTCTTTCCCTCTTGGAGCAAAGCGTCCCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_107920.p1 GENE.R_Transcript_107920~~R_Transcript_107920.p1 ORF type:5prime_partial len:253 (+),score=38.59,TFIID-31kDa|PF02291.11|1.4e-45,CENP-S|PF15630.2|4.2e-06 R_Transcript_107920:3-761(+)
TCYTRCQNTPATAKAFKFNLSLLRFSLSDSLLHWPSSGRTFPSPQALPYVRSRRPTVRLLSLHESGPRPSGPQIRRVMAEGEEDLPRDAKIVKSLLKSMGVEEYEPRVVHQFLELWYRYVVDVLTDAQVYSEHAGKGTIDCDDIKLAIQSKVNFSFSQPPPREVLLELARNRNKTPLPKSLGGPGIPLPPEEDTLISPNYQLVIPKKQPPQATEETEEEEASAPSSSQEPKGDLGQHTPQRVSFPLGAKRPK*

Click here to download the sequence:
Link to NCBI Protein BLAST