Transcript Information: R_Transcript_107921.p1


Annotated TAIR IDAT1G54140.1
Annotated Gene NameTATA binding protein associated factor 21kDa subunit
Annotated Gene Symbol(s)TAFII21, TAF9
Annotation TypeOrtholog
Chromosome Positionchr1:20214076-20214869 | Reverse length=183
E-Value4.8E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3623875442903
Replicate 21.6576026644446
Replicate 32.0495502059715
Condition 2: 8 Hour
Replicate 12.319713521318
Replicate 23.1775989984843
Replicate 32.7705089894275
Condition 3: 24 Hour
Replicate 12.5374418514831
Replicate 22.2055258890577
Replicate 33.2255564801743


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_107921.p1 GENE.R_Transcript_107921~~R_Transcript_107921.p1 ORF type:5prime_partial len:190 (+),score=22.25,TFIID-31kDa|PF02291.11|2.3e-32,CENP-S|PF15630.2|2.5e-06 R_Transcript_107921:3-572(+)
ACATGCTATACTCGATGTCAAAACACCCCAGCTACCGCAAAAGCCTTCAAATTCAATCTCTCTCTCCTTCGCTTCTCTCTCTCAGACTCTCTCCTTCACTGGCCATCGAGCGGTCGGACGTTCCCCAGTCCCCAGGCCCTGCCCTACGTCCGGTCTCGGCGTCCCACGGTCCGGCTGCTCAGTCTTCACGAATCAGGACCACGACCATCAGGACCTCAGATTAGAAGGGTGATGGCAGAAGGAGAAGAAGACTTGCCCCGGGATGCCAAGATTGTGAAATCATTGTTAAAGTCAATGGGTGTAGAGGAGTATGAACCTCGTGTTGTGCACCAGTTTCTGGAGCTTTGGTATCGATATGTTGTTGATGTATTGACGGATGCACAAGTCTACTCAGAGCATGCTGGCAAAGGCACAATCGACTGTGATGATATTAAGCTTGCAATTCAATCGAAAGTGAATTTCAGCTTCTCACAACCACCTCCTCGTGAGGTGCTTTTAACTTCTCACAACCTGTTCTATAGAAATTTATCTGGTGATGTTAGCGTGAAACTTGGTTCTGCTTGGCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_107921.p1 GENE.R_Transcript_107921~~R_Transcript_107921.p1 ORF type:5prime_partial len:190 (+),score=22.25,TFIID-31kDa|PF02291.11|2.3e-32,CENP-S|PF15630.2|2.5e-06 R_Transcript_107921:3-572(+)
TCYTRCQNTPATAKAFKFNLSLLRFSLSDSLLHWPSSGRTFPSPQALPYVRSRRPTVRLLSLHESGPRPSGPQIRRVMAEGEEDLPRDAKIVKSLLKSMGVEEYEPRVVHQFLELWYRYVVDVLTDAQVYSEHAGKGTIDCDDIKLAIQSKVNFSFSQPPPREVLLTSHNLFYRNLSGDVSVKLGSAWQ*

Click here to download the sequence:
Link to NCBI Protein BLAST