Transcript Information: R_Transcript_107923.p1


Annotated TAIR IDAT1G54140.1
Annotated Gene NameTATA binding protein associated factor 21kDa subunit
Annotated Gene Symbol(s)TAFII21, TAF9
Annotation TypeOrtholog
Chromosome Positionchr1:20214076-20214869 | Reverse length=183
E-Value2.1E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.566471202043
Replicate 20.43440621550962
Replicate 30.55292125232092
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.43814232531968
Condition 3: 24 Hour
Replicate 10
Replicate 20.30421046745624
Replicate 30.6792735937313


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_107923.p1 GENE.R_Transcript_107923~~R_Transcript_107923.p1 ORF type:5prime_partial len:290 (+),score=48.88,TFIID-31kDa|PF02291.11|1.9e-45,CENP-S|PF15630.2|5.3e-06 R_Transcript_107923:2-871(+)
TACATGCTATACTCGATGTCAAAACACCCCAGCTACCGCAAAAGCCTTCAAATTCAATCTCTCTCTCCTTCGCTTCTCTCTCTCAGACTCTCTCCTTCACTGGCCATCGAGCGGTCGGACGTTCCCCAGTCCCCAGGCCCTGCCCTACGTCCGGTCTCGGCGTCCCACGGTCCGGCTGCTCAGTCTTCACGAATCAGGACCACGACCATCAGGACCTCAGCTTTGCAACTTTGGGGATTGGTTGAGATTTTCATCGTGAAGGCTCTTGTGTGTCAAGATGACCCGAAAGGGCTCCCAAAGCCCCCTGATGTCCACAACTCATCCTTTAAGGATAGAAGGGTGATGGCAGAAGGAGAAGAAGACTTGCCCCGGGATGCCAAGATTGTGAAATCATTGTTAAAGTCAATGGGTGTAGAGGAGTATGAACCTCGTGTTGTGCACCAGTTTCTGGAGCTTTGGTATCGATATGTTGTTGATGTATTGACGGATGCACAAGTCTACTCAGAGCATGCTGGCAAAGGCACAATCGACTGTGATGATATTAAGCTTGCAATTCAATCGAAAGTGAATTTCAGCTTCTCACAACCACCTCCTCGTGAGGTCCTACTAGAGCTGGCTAGAAACAGGAATAAAACTCCATTGCCGAAGAGTCTTGGAGGCCCCGGGATACCCCTTCCACCTGAAGAAGACACGTTGATCAGCCCGAACTACCAGCTTGTGATACCAAAGAAGCAGCCACCCCAGGCAACGGAAGAAACCGAGGAAGAAGAGGCTTCTGCCCCTAGCTCGTCCCAAGAGCCAAAGGGTGATTTGGGCCAACATACTCCACAGAGGGTTTCTTTCCCTCTTGGAGCAAAGCGTCCCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_107923.p1 GENE.R_Transcript_107923~~R_Transcript_107923.p1 ORF type:5prime_partial len:290 (+),score=48.88,TFIID-31kDa|PF02291.11|1.9e-45,CENP-S|PF15630.2|5.3e-06 R_Transcript_107923:2-871(+)
YMLYSMSKHPSYRKSLQIQSLSPSLLSLRLSPSLAIERSDVPQSPGPALRPVSASHGPAAQSSRIRTTTIRTSALQLWGLVEIFIVKALVCQDDPKGLPKPPDVHNSSFKDRRVMAEGEEDLPRDAKIVKSLLKSMGVEEYEPRVVHQFLELWYRYVVDVLTDAQVYSEHAGKGTIDCDDIKLAIQSKVNFSFSQPPPREVLLELARNRNKTPLPKSLGGPGIPLPPEEDTLISPNYQLVIPKKQPPQATEETEEEEASAPSSSQEPKGDLGQHTPQRVSFPLGAKRPK*

Click here to download the sequence:
Link to NCBI Protein BLAST