Transcript Information: R_Transcript_10794.p1


Annotated TAIR IDAT3G58590.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21666262-21668487 | Forward length=741
E-Value2.1E-242
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1730694700976
Replicate 20.32385039202516
Replicate 30.88329322350202
Condition 2: 8 Hour
Replicate 10.78682085306058
Replicate 20.5173468806444
Replicate 30.88658252387494
Condition 3: 24 Hour
Replicate 10.85575373985015
Replicate 20.85045985439244
Replicate 31.0971985639961


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_10794.p1 GENE.R_Transcript_10794~~R_Transcript_10794.p1 ORF type:complete len:778 (+),score=102.57,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|1.4e-07,PPR_2|PF13041.2|0.73,PPR_2|PF13041.2|0.0038,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|1.4e-06,PPR_2|PF13041.2|21,PPR_2|PF13041.2|4.1e-08,PPR_2|PF13041.2|15,PPR_2|PF13041.2|7.2e+03,PPR_2|PF13041.2|5.6e-11,PPR_2|PF13041.2|0.00032,PPR_2|PF13041.2|4.5e-08,PPR_2|PF13041.2|0.027,PPR_2|PF13041.2|25,PPR|PF01535.16|0.04,PPR|PF01535.16|5.7e-08,PPR|PF01535.16|0.0082,PPR|PF01535.16|0.00026,PPR|PF01535.16|4.1,PPR|PF01535.16|0.089,PPR|PF01535.16|5.3e+03,PPR|PF01535.16|0.84,PPR|PF01535.16|14,PPR|PF01535.16|0.048,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|2e-05,PPR|PF01535.16|0.00033,PPR|PF01535.16|0.94,PPR|PF01535.16|0.18,PPR_1|PF12854.3|64,PPR_1|PF12854.3|3.4e-06,PPR_1|PF12854.3|7.4,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|9.8e+02,PPR_1|PF12854.3|29,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.068,PPR_1|PF12854.3|0.00053,PPR_1|PF12854.3|0.02,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|0.33,PPR_3|PF13812.2|0.87,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|34,PPR_3|PF13812.2|9.2e+02,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|7.7,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|2.2e+03,PPR_3|PF13812.2|68,PPR_3|PF13812.2|18,PPR_3|PF13812.2|0.00045,PPR_3|PF13812.2|0.73,PPR_3|PF13812.2|0.014,PPR_3|PF13812.2|0.5,PPR_3|PF13812.2|4.3 R_Transcript_10794:137-2470(+)
ATGATCACTTCAATGTTCAAACCAAACGCCAAAAATTTCTCAAAACCTCTATCCACCATTCTCAACTCCTTTTCTATCACTTCTACTCGGAATCATAACTATTTCCACAGTACCCTTCAAAAACCCTGCAATAGGTACTACGCTGATGAGTATCTCCATCATCGCCTCCATAAATGCATTGAAACTCAAACCTTTGAAGCTCTTCAATCCTTTCATGCCCTCATCGTCACTCTAGGACCATATGCAAGACAACCCATTTATTTTACCAACAATGTCATCTCTTTGTATGTCTCTTTTGACGAGTTGGAGGTTGCGCGTAAGGTGTTCGACGAAATGCTCCAAAGAAATGGGGTTTCATATAATGCTTTGATCAGTGGGTATAGTCGATATGGGCAGGTAGAGGAAGCTTGGGAAATGTTTTGTGGTATGTGGGGTTGTGGTTTCGGATCGACCCAGTTCACTTTTGGTGGTCTTTTGTCATGTCATGGTTTGGACTTAAGGAGAGGAGGTGTTATGCATGGGTTAGTGTTTAAGAATGGATTGTTTTTTTCTGATCCCTATGTAGGGACTGCATTTTTAGGTATGTTTGGAAGAAATGGATGTATTGATGAGGTAATGAGAGTCTTTGAAGATATGCCTAAGAAGAATGTGGTCACATGGAATTCTGTTATTTCTTTGTTGGGATATCATGGGTTTGTTGAAGAGTCAATGGTAATGTTTTGCAAGCTCTTGAGGTCTGGACATGGTCTTACTGGGAGCACTATAGTGGGATTGTTGTCTGGTTTTGTGGCACCGGAAGATTTTGAATTAGGACATCAAGTACATAGTTTAGTGATTAAAAATGGTTTAAGTTGTGATGTTTCTGCTTCCAATGCCCTGCTTAAAATGTTTGTCAAGTGTATGAACTTATCTTCCGCTGAAAGAATGTTCAAGGAGGTCTGTTTTTTGGATATTGTGACATATAATACCTTAATTGGAGCGTTGGCAAGAAGTGAGACACCTGGTAAGGGATTAGAGCTGCTTTTGTCTTTGCTTGCTGAAGGAATGAGGCCTAACAACATCACATATGTTGGTGTCATCAATTGTTGTGCTAATCTACGAATAACAACCTGTGGAGAATGTATTCATGCTAAGGTGATACGAAACTCATTCCAAAGTGATGTTTTTGTGGGTAGTGCACTGATTGACTTTTATGGAAAATGTGATATGTTGAACTCTGCTCAATCTTGTTTTGATGACATACTTGATAAAAATGTGGTTTCATGGAATAGTTTAATAATGGCTTGTACCTCTAAGAGTCAAGACATTGCCAATGTTTTGTTTCAAGAGATGCTGCAGTTGGGTTATCGTCCTAATGAGTTTACATTTTCTACTGTGTTGAAAGTGTCACCTGTCTTTGAACTACAGCAGCTTCATTGTTTGACGATAAAATTGGGTTACCTTAGAATGGTATACGTGTTTACATCACTTATTACCTCATATGCCAGAAATGGATTATTATCAGATGCATTGTTAATTACCAAATGTATTGAGATGCCACTTTCAGTGGTCTCCTCCAATGTCATAGCTGCTGCTTACAATAGAGCGGGTCAGTATGATAAATCTCTCGAGAAGCTTTCTGGAGTTGATGAACCTGATATTATCTCATGGAATATTCTTGTGTCTACTTGTTCTCATAGTGGTCATCATAAGGAAGCATTTGAACTTTTCAAATACATGCTTGAACTTCAAATATATCCTGACAATTATACAATTGTCAGTGTTTTGAGTGGTTGCTCAAGTCTCCATTGCCTTGCTTTGGGTACTTCTGTCCATGGTCTCCTGACAAAAACCAATTTTCATTATAGCGACACATTTGTGTGCAACGTCTTGATCGACATGTATGCAAAGTGTGGATGTGTTGAAGAGTCACAGAAGGTCTTTGAAGTTATGAAAGACAAGAACCTTGTATCATGGACAACTGTAATTTCTGCTCTTGGTAATCATGGCTATGCACATCAGGCTCTGGAAAGGTTCAAGGAAATGGAACTTCATAAGATCGTTCCAGATTCTGTATTATTTGTTGTTTTGCTTTCAGCATGCAGACATCGAGGCTTAGTTAAGGTAGGAATAGACTTGTTTGAACGAATGCAAAAGGTATACAAGATTGAGCCTGAGATAGATCATTATCATGTTCTAGTCGACCTATTGGCCAGGCATGGGCATTTGAAGGAAGCAGAGCAAGTAATCTCTAGTATGCCGTTCCCTCCAAATGCTCTCATATGGCGCACTTTCCTTGTGGGTTGCAAGAGATGGAGGATCAATGAGGCTTCGTCCAGAGGACAGTTAACCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_10794.p1 GENE.R_Transcript_10794~~R_Transcript_10794.p1 ORF type:complete len:778 (+),score=102.57,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|1.4e-07,PPR_2|PF13041.2|0.73,PPR_2|PF13041.2|0.0038,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|1.4e-06,PPR_2|PF13041.2|21,PPR_2|PF13041.2|4.1e-08,PPR_2|PF13041.2|15,PPR_2|PF13041.2|7.2e+03,PPR_2|PF13041.2|5.6e-11,PPR_2|PF13041.2|0.00032,PPR_2|PF13041.2|4.5e-08,PPR_2|PF13041.2|0.027,PPR_2|PF13041.2|25,PPR|PF01535.16|0.04,PPR|PF01535.16|5.7e-08,PPR|PF01535.16|0.0082,PPR|PF01535.16|0.00026,PPR|PF01535.16|4.1,PPR|PF01535.16|0.089,PPR|PF01535.16|5.3e+03,PPR|PF01535.16|0.84,PPR|PF01535.16|14,PPR|PF01535.16|0.048,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|2e-05,PPR|PF01535.16|0.00033,PPR|PF01535.16|0.94,PPR|PF01535.16|0.18,PPR_1|PF12854.3|64,PPR_1|PF12854.3|3.4e-06,PPR_1|PF12854.3|7.4,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|9.8e+02,PPR_1|PF12854.3|29,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.068,PPR_1|PF12854.3|0.00053,PPR_1|PF12854.3|0.02,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|0.33,PPR_3|PF13812.2|0.87,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|34,PPR_3|PF13812.2|9.2e+02,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|7.7,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|2.2e+03,PPR_3|PF13812.2|68,PPR_3|PF13812.2|18,PPR_3|PF13812.2|0.00045,PPR_3|PF13812.2|0.73,PPR_3|PF13812.2|0.014,PPR_3|PF13812.2|0.5,PPR_3|PF13812.2|4.3 R_Transcript_10794:137-2470(+)
MITSMFKPNAKNFSKPLSTILNSFSITSTRNHNYFHSTLQKPCNRYYADEYLHHRLHKCIETQTFEALQSFHALIVTLGPYARQPIYFTNNVISLYVSFDELEVARKVFDEMLQRNGVSYNALISGYSRYGQVEEAWEMFCGMWGCGFGSTQFTFGGLLSCHGLDLRRGGVMHGLVFKNGLFFSDPYVGTAFLGMFGRNGCIDEVMRVFEDMPKKNVVTWNSVISLLGYHGFVEESMVMFCKLLRSGHGLTGSTIVGLLSGFVAPEDFELGHQVHSLVIKNGLSCDVSASNALLKMFVKCMNLSSAERMFKEVCFLDIVTYNTLIGALARSETPGKGLELLLSLLAEGMRPNNITYVGVINCCANLRITTCGECIHAKVIRNSFQSDVFVGSALIDFYGKCDMLNSAQSCFDDILDKNVVSWNSLIMACTSKSQDIANVLFQEMLQLGYRPNEFTFSTVLKVSPVFELQQLHCLTIKLGYLRMVYVFTSLITSYARNGLLSDALLITKCIEMPLSVVSSNVIAAAYNRAGQYDKSLEKLSGVDEPDIISWNILVSTCSHSGHHKEAFELFKYMLELQIYPDNYTIVSVLSGCSSLHCLALGTSVHGLLTKTNFHYSDTFVCNVLIDMYAKCGCVEESQKVFEVMKDKNLVSWTTVISALGNHGYAHQALERFKEMELHKIVPDSVLFVVLLSACRHRGLVKVGIDLFERMQKVYKIEPEIDHYHVLVDLLARHGHLKEAEQVISSMPFPPNALIWRTFLVGCKRWRINEASSRGQLT*

Click here to download the sequence:
Link to NCBI Protein BLAST