Transcript Information: R_Transcript_107940.p1


Annotated TAIR IDAT1G01170.1
Annotated Gene NameProtein of unknown function (DUF1138)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:74105-74443 | Reverse length=83
E-Value1.6E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8889578489483
Replicate 23.1721029405918
Replicate 32.4719501003042
Condition 2: 8 Hour
Replicate 12.1138876213449
Replicate 26.1130468342809
Replicate 33.6564395494305
Condition 3: 24 Hour
Replicate 17.4323836348682
Replicate 27.6162045089763
Replicate 35.9836890510942


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_107940.p1 GENE.R_Transcript_107940~~R_Transcript_107940.p1 ORF type:5prime_partial len:139 (+),score=18.62,DUF1138|PF06592.9|1.1e-40 R_Transcript_107940:3-419(+)
TGTTCATTAGGAAGTTTAACGCTGCTTGATTGGTACAAGTGTAATGAAGTAGAGTTGGGTATTTGTCACACACAAAAAGGCCACCTAAGAAGGTTCACGAACACCCAGTGTCATCTTCTTCTTCTTGCTTGGAACCAAAAAAAAAATCTTCTTCTTCTTGCTTCCGGGAGCTTGATCATGGCAGTGAAGTATATAATTTCGTCTGTGTTGGGATCATTTGCTATTTCATATGTAATTTTTGATGTCATTGCTGACAAGAAGATATTTGGAGGGACAACACCAAGAACTGTCGCAACCAAGGAGTGGTGGGAAGAAACGGACAGGAAGTTCCAATCATGGCCACGAACTGCAGGGCCTCCGGTGGTCATGAACCCTACAAGCCGCCAGAACTTCATCGTCAAATCCCCAGGCACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_107940.p1 GENE.R_Transcript_107940~~R_Transcript_107940.p1 ORF type:5prime_partial len:139 (+),score=18.62,DUF1138|PF06592.9|1.1e-40 R_Transcript_107940:3-419(+)
CSLGSLTLLDWYKCNEVELGICHTQKGHLRRFTNTQCHLLLLAWNQKKNLLLLASGSLIMAVKYIISSVLGSFAISYVIFDVIADKKIFGGTTPRTVATKEWWEETDRKFQSWPRTAGPPVVMNPTSRQNFIVKSPGT*

Click here to download the sequence:
Link to NCBI Protein BLAST