Transcript Information: R_Transcript_108011.p1


Annotated TAIR IDAT4G05000.1
Annotated Gene NameVacuolar protein sorting-associated protein VPS28 family protein
Annotated Gene Symbol(s)VPS28-2
Annotation TypeOrtholog
Chromosome Positionchr4:2563953-2564585 | Forward length=210
E-Value4.6E-132
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 170.838872276647
Replicate 275.386716732804
Replicate 375.264994958787
Condition 2: 8 Hour
Replicate 167.627626997153
Replicate 282.841743202107
Replicate 391.363106789281
Condition 3: 24 Hour
Replicate 176.526024092347
Replicate 266.900951968084
Replicate 365.246205399989


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108011.p1 GENE.R_Transcript_108011~~R_Transcript_108011.p1 ORF type:complete len:210 (+),score=48.80,VPS28|PF03997.8|1.8e-70 R_Transcript_108011:943-1572(+)
ATGGAAGTGAAGTTGTGGAATGACAAGCGTGAAAGAGAAATGTATGACAATTATGCTGAACTTTATGCCATTATCAAGGCCACTGAGAAGCTAGAAAAAGCCTATATTAGGGACATAATCACCCCTTCGGAATACGAAACTGAATGCCAGAAATTGATAGCCCATTTCAAAACCCTTTCATCCACTTTGAAAGACAATGTCCCAAGTGTCGAAAGGTTTGCTGATATGTACAAGATGGACTGCCCTGCTGCCTTGAATAGGCTGGTGACATCCGGTGTGCCCGCCACTGTTGAGCACAGGGCGGCAGCTGCTGCGTCTGCCACCACCTCAGCTGCCATTGTGGCTGAGTGTGTTCAGAATTTCATCACAGCTATGGACTCGTTGAAACTGAACATGGTGGCTGTTGATCAAGTTTACCCATTGTTGTCGGATCTCTCGACCTCATTGAACAAGCTGAGCTTTTTGCCTCATGATTTCGAGGGGAAGACGAAGATGAAGGAATGGCTGGGACGGTTGTCCAAGATGGGAGCTGCGGATGAGCTCACTGAGCAGCAAGCAAGGCAGCTTCACTTCGATCTCGAGTCTTCGTACAACTCGTTTATGGCTGCTTTGCCCAATGCTGGGACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108011.p1 GENE.R_Transcript_108011~~R_Transcript_108011.p1 ORF type:complete len:210 (+),score=48.80,VPS28|PF03997.8|1.8e-70 R_Transcript_108011:943-1572(+)
MEVKLWNDKREREMYDNYAELYAIIKATEKLEKAYIRDIITPSEYETECQKLIAHFKTLSSTLKDNVPSVERFADMYKMDCPAALNRLVTSGVPATVEHRAAAAASATTSAAIVAECVQNFITAMDSLKLNMVAVDQVYPLLSDLSTSLNKLSFLPHDFEGKTKMKEWLGRLSKMGAADELTEQQARQLHFDLESSYNSFMAALPNAGT*

Click here to download the sequence:
Link to NCBI Protein BLAST