Transcript Information: R_Transcript_10804.p1


Annotated TAIR IDAT1G11290.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)CRR22
Annotation TypeHomolog
Chromosome Positionchr1:3791454-3793883 | Reverse length=809
E-Value5E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2618942969824
Replicate 21.0286371961875
Replicate 31.1882457542673
Condition 2: 8 Hour
Replicate 11.6582646289921
Replicate 21.4176927968475
Replicate 32.7462811457358
Condition 3: 24 Hour
Replicate 11.9848248323663
Replicate 21.6207755092499
Replicate 32.333847473819


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_10804.p1 GENE.R_Transcript_10804~~R_Transcript_10804.p1 ORF type:complete len:694 (+),score=112.73,PPR_2|PF13041.2|4.9e-07,PPR_2|PF13041.2|1.6e+02,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|42,PPR_2|PF13041.2|4.1e-11,PPR_2|PF13041.2|14,PPR_2|PF13041.2|3.8e-08,PPR_2|PF13041.2|7.7e+03,PPR_2|PF13041.2|1.9e-09,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|8.6e-11,PPR_2|PF13041.2|13,PPR_2|PF13041.2|2.5e+02,PPR_2|PF13041.2|1.2e+04,PPR|PF01535.16|2.4,PPR|PF01535.16|2.6,PPR|PF01535.16|0.00049,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|4.9,PPR|PF01535.16|9.3e-09,PPR|PF01535.16|2.1,PPR|PF01535.16|0.00094,PPR|PF01535.16|39,PPR|PF01535.16|0.00018,PPR|PF01535.16|4.3e+03,PPR|PF01535.16|0.013,PPR|PF01535.16|2.7e-09,PPR|PF01535.16|1.9,PPR|PF01535.16|1.2,PPR|PF01535.16|5.7e+03,PPR_1|PF12854.3|4.8e+02,PPR_1|PF12854.3|34,PPR_1|PF12854.3|17,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|3.7e-06,PPR_1|PF12854.3|6.9e+02,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|0.044,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|44,PPR_1|PF12854.3|0.31,PPR_1|PF12854.3|8.5e+02,PPR_1|PF12854.3|10,PPR_1|PF12854.3|0.00022,PPR_1|PF12854.3|11,PPR_1|PF12854.3|1.1,PPR_3|PF13812.2|21,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|5.8e+03,PPR_3|PF13812.2|5e+03,PPR_3|PF13812.2|3.7e+03,PPR_3|PF13812.2|65,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|3,PPR_3|PF13812.2|0.41,PPR_3|PF13812.2|2.6e+02,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|6.5e+02,PPR_3|PF13812.2|0.079,PPR_3|PF13812.2|0.0064,PPR_3|PF13812.2|4,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|3.5e+03,PPR_3|PF13812.2|1.6e+04 R_Transcript_10804:464-2545(+)
ATGGCCAGAATAGTGGTCAAATGGACATCAAAGATCCAATCTTTCTTACACAAAGGGTTGATTAATCAAGCCCTGTTATATTTCCTACGCATGCAAAGAGCAGGGATTGAACCCACTGAAACCACATTCTCGACCACCTTAACTGCTTGTAGTCAATCACCTCACAAATCATTCGGTTTAAGCATGCATAGTTTAATCCTCAAAAAAGGGTACTCTAATCAGCTCTTTGTTTCAAGTGGGTTAATCTCTATGTACAGTAGATTCAGTCTTGTCGACAATGCCCGCCGAATGTTTGATGAAACGCCTGAACGGGATGGGTTCATTTGGAATTCTATGATTTCAGGTTACTCACAGAATAAGTGTGGCATGGAAGCCTGGAGATTGTTTTTAGCCTTGTTTAGAGGGTGTTCGGATCGGAATGCTTTTGTTAGTGATTATACTGTTGTCAGTGTGCTCAATGCTTGTGCTCATTTGGGGTATTATAGGTTGGGTGAGTCTGTCCATGGTTATGCAATTAAGGCTGGTTTCGGGTCAGATGTATTTGTTGGTAGCTCCCTTGTGGATATGTATTCTAAATGTGAAGAGTTAGATAGTGCTAGGTTGGTCTTTGATCAGTTGGGGAAGTGGGATATTGTGGTGTGGAATACTATGATTACTGGATATGCTCAAAATGGTTATGAAGATGAAGCTGTTGAATTATTCCTTCAGATGGAACATGAAGGGCTTTCTCCTAATTATACAACCTTTTTGGCAGTCATAGATGCATCATCTGTGATGCCAGTTGACACACTTGGTAAATCTTTTCATGCTAAAGCATTGAAGTTTGGATTTCTATCAGATGTTTACTTGGGAACTGCCCTAGTTGACATGTACTCAAAGTTTCTGGATATGGCTAATGCTGAAAAGACATTCAGTGAGATGTACAAAAAGAATGCGGTATCATACAATGCACTTATCACAGGTTATGGGCTGGCTGGTGAGCATGAAATGGCACTAGGAACTTTTATGTCACTGATATTTCAGGGAATGAAACCTGACGCTTGCACTTTTGTTGGCCTTTTCACTTCTTGTGCCTCATCTTGTGCCTCTGTTGAAGGGGCACAAGTGCATTCTCATGCAATTATGCTTGGTGTGGACTTGGATGTTTCAGCGTCAATAGTGAATTTTTATTCAAAATGTGGGTTCATTGACGATGCAATGAAAGCACTTGAGACTGCACCGGTGAATGATGTTGTTTCGTGGACTGCCATCATTTCAAGACTCGTCCAAAACAATGAAGCTCAAAAAGCTCTTGAGATATTCTGTGAAATGCACAGTCTTTCAGAAAAAGCAGATACATTTTCCTACTCTAGTGTCATCAAGGCAGTGGCTAGCCTGGCATCTGTTGCAAAAGGAAGACTCTTGCATAGCCTTGTGATTAAAATGGGCCTGGGTCACAATATATTTGTGGGTAGTGCACTGATTGACATGTATTCCAAATGTGGGGTGGTGGAAGATGCACAAACATTGTTCAGTGAGCTGCCTGAGAAAAATGTAGTCTCATGGAATTCGATGGTTATGGGTTATGCTCAAAATGGTTTCCCACAAGAAGCATTGTTCCTATTCCAAGAAATGGAGAATAATGGAGTCTTGCCTACACCTGTAACCTTTGTCGGGATTCTTCTTGCATGTTGTCACGCAGGTTTAGTTAAAGAAGGCAGGCACTATTATCACTTGATGGAGTCTCACTATGGGATTTCACCCTCAATAGAGCACTGCACCTGTATGGTAAACCTTCTTGGTCGTTGTGGTTATGTCGATGAGGCAGAAGTATTCCTTCTTAGTTCACCTTTTAAAGGTGAATATGAAATTTGGAGATCCCTTCTCACTACTTGTGAAGCTTACAAAGATTTTGATGTTGCTGCTCGAGTTGCAGAGATTTGCTTACACTTAAACCCCGATGACCCCCCCACTTATACCATTCTATCCAACATATATGCAACTAAACAACTGTGGTCAGAGGTTGGAAGATCAAGGGATCTCGTGAAGACGGCAGGTGTTGTAAAGGAACCTGGGTGTAGCTGGATTGAAGCTAAAGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_10804.p1 GENE.R_Transcript_10804~~R_Transcript_10804.p1 ORF type:complete len:694 (+),score=112.73,PPR_2|PF13041.2|4.9e-07,PPR_2|PF13041.2|1.6e+02,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|42,PPR_2|PF13041.2|4.1e-11,PPR_2|PF13041.2|14,PPR_2|PF13041.2|3.8e-08,PPR_2|PF13041.2|7.7e+03,PPR_2|PF13041.2|1.9e-09,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|8.6e-11,PPR_2|PF13041.2|13,PPR_2|PF13041.2|2.5e+02,PPR_2|PF13041.2|1.2e+04,PPR|PF01535.16|2.4,PPR|PF01535.16|2.6,PPR|PF01535.16|0.00049,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|4.9,PPR|PF01535.16|9.3e-09,PPR|PF01535.16|2.1,PPR|PF01535.16|0.00094,PPR|PF01535.16|39,PPR|PF01535.16|0.00018,PPR|PF01535.16|4.3e+03,PPR|PF01535.16|0.013,PPR|PF01535.16|2.7e-09,PPR|PF01535.16|1.9,PPR|PF01535.16|1.2,PPR|PF01535.16|5.7e+03,PPR_1|PF12854.3|4.8e+02,PPR_1|PF12854.3|34,PPR_1|PF12854.3|17,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|3.7e-06,PPR_1|PF12854.3|6.9e+02,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|0.044,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|44,PPR_1|PF12854.3|0.31,PPR_1|PF12854.3|8.5e+02,PPR_1|PF12854.3|10,PPR_1|PF12854.3|0.00022,PPR_1|PF12854.3|11,PPR_1|PF12854.3|1.1,PPR_3|PF13812.2|21,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|5.8e+03,PPR_3|PF13812.2|5e+03,PPR_3|PF13812.2|3.7e+03,PPR_3|PF13812.2|65,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|3,PPR_3|PF13812.2|0.41,PPR_3|PF13812.2|2.6e+02,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|6.5e+02,PPR_3|PF13812.2|0.079,PPR_3|PF13812.2|0.0064,PPR_3|PF13812.2|4,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|3.5e+03,PPR_3|PF13812.2|1.6e+04 R_Transcript_10804:464-2545(+)
MARIVVKWTSKIQSFLHKGLINQALLYFLRMQRAGIEPTETTFSTTLTACSQSPHKSFGLSMHSLILKKGYSNQLFVSSGLISMYSRFSLVDNARRMFDETPERDGFIWNSMISGYSQNKCGMEAWRLFLALFRGCSDRNAFVSDYTVVSVLNACAHLGYYRLGESVHGYAIKAGFGSDVFVGSSLVDMYSKCEELDSARLVFDQLGKWDIVVWNTMITGYAQNGYEDEAVELFLQMEHEGLSPNYTTFLAVIDASSVMPVDTLGKSFHAKALKFGFLSDVYLGTALVDMYSKFLDMANAEKTFSEMYKKNAVSYNALITGYGLAGEHEMALGTFMSLIFQGMKPDACTFVGLFTSCASSCASVEGAQVHSHAIMLGVDLDVSASIVNFYSKCGFIDDAMKALETAPVNDVVSWTAIISRLVQNNEAQKALEIFCEMHSLSEKADTFSYSSVIKAVASLASVAKGRLLHSLVIKMGLGHNIFVGSALIDMYSKCGVVEDAQTLFSELPEKNVVSWNSMVMGYAQNGFPQEALFLFQEMENNGVLPTPVTFVGILLACCHAGLVKEGRHYYHLMESHYGISPSIEHCTCMVNLLGRCGYVDEAEVFLLSSPFKGEYEIWRSLLTTCEAYKDFDVAARVAEICLHLNPDDPPTYTILSNIYATKQLWSEVGRSRDLVKTAGVVKEPGCSWIEAKG*

Click here to download the sequence:
Link to NCBI Protein BLAST