Transcript Information: R_Transcript_108043.p1


Annotated TAIR IDAT5G47790.1
Annotated Gene NameSMAD/FHA domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19351396-19352579 | Forward length=369
E-Value6.9E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.350634734865
Replicate 214.990601873798
Replicate 318.160296472625
Condition 2: 8 Hour
Replicate 118.915882155192
Replicate 223.670302849904
Replicate 326.450657818447
Condition 3: 24 Hour
Replicate 123.216341092881
Replicate 216.591118174443
Replicate 321.444034997298


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108043.p1 GENE.R_Transcript_108043~~R_Transcript_108043.p1 ORF type:complete len:444 (+),score=98.37,FHA|PF00498.22|1.2e+04,FHA|PF00498.22|2.3e-17 R_Transcript_108043:254-1585(+)
ATGTACGGGAAGGCAGGTGTTCTTGATAGATTTAAGAAAGCTCAAACCTTGGAGCCCTTCTCCGTTGATCTTACACAGTCACAACCGAAGCAGGTCTCAAGCTCAGCTGCTGCTACTGCTAAACAACCACCGGTGTCCCAGTCCCAAATTCATAGTTATCGTCACCAACACCAACACCAACACCAACAGCAACAACATTCGGTAGTGGATGTTCGGTCGTCAACAACAACAACTAAAACATCATCATCATCAGCCACTCAACTTGGTGGTTCCCAATCTAATTGGCAGCCTCCTGATTGGGCAATTGAACCTCGTCCTGGCGTCTATTATCTTGAGGTTTTAAAAGACGGAGATATTCTTGATCGGATTCCTCTTCATAAGCGCAGGCACATCTTCGGTAGGCAGTTTCATACTTGTGATTTTGTTCTTGATCATCAGTCTGTTTCCCGTCAACATGCTGCTGTCGTTCCCCACAAAAATGGAAGCATATATGTGATCGATTTGGGATCTGCCCATGGTACCTTTGTTGCCAATGAGAGATTAGCAAAAGATATTCCAGTAGAACTGGAAGTAGGCCAATCTTTGCGCTTTGCTGCTTCTACTAGAACTTATATCTTGAGGAAGAATGAAGATGCTCTTTTCCCACCTACTCCTGCCCCCACCGACATCGATTTGCTTTCACCCCCTGATCCTTCTGATGTCGATGCTCTTGTTGCTTATAACACTTTATTAAATCGCTATGGTATTACCACCAAATCCCACCTCTCTCTTCTTACTAGTTCTACCACCCCAAATACTACTGATACCTCTCAACCTGAAAGGCTTCCTCCTAATAAGAGACTTAGGAAAACAAGAGTCGTTCTCAGAGACCAAGTTGGCGGTGACCTCGTTCAAGTTGTTGGAGTCTCTGATGGTGCCGATGTCGAAACTGAACCTGGTCCTCTTGGTCTCAAAGAGGGAAGTCTTGTCGGGAAGTATGAATCACTTGTGCAAATCACTGTCATACCCAAAGGGAAGGAACTCGAACACCCATCTCTCAAGGAAGAGAATCTCCCCCAAGCAGGTGTTACTGACAAACTACAACAGGTTTTGAACAAGGTTAAAAACACCCCCAGTTCTAAGATAGGCATCTACGATGATTTGTATGGTGAAACTTTTTCTGGGAAAGTGGGCTCGTCATGGGCTCATCCTTCTGCTACTTCTGGTGGGAGGGAACCGTCGCCATCAAACTGCAGAGGCAGAGATCTTATTAGTCCACCAAATTCTACACAAGGAAACAATAAGAATCAGGCTGATCATGACGATGATGATGACGATTTGTTTGGTGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108043.p1 GENE.R_Transcript_108043~~R_Transcript_108043.p1 ORF type:complete len:444 (+),score=98.37,FHA|PF00498.22|1.2e+04,FHA|PF00498.22|2.3e-17 R_Transcript_108043:254-1585(+)
MYGKAGVLDRFKKAQTLEPFSVDLTQSQPKQVSSSAAATAKQPPVSQSQIHSYRHQHQHQHQQQQHSVVDVRSSTTTTKTSSSSATQLGGSQSNWQPPDWAIEPRPGVYYLEVLKDGDILDRIPLHKRRHIFGRQFHTCDFVLDHQSVSRQHAAVVPHKNGSIYVIDLGSAHGTFVANERLAKDIPVELEVGQSLRFAASTRTYILRKNEDALFPPTPAPTDIDLLSPPDPSDVDALVAYNTLLNRYGITTKSHLSLLTSSTTPNTTDTSQPERLPPNKRLRKTRVVLRDQVGGDLVQVVGVSDGADVETEPGPLGLKEGSLVGKYESLVQITVIPKGKELEHPSLKEENLPQAGVTDKLQQVLNKVKNTPSSKIGIYDDLYGETFSGKVGSSWAHPSATSGGREPSPSNCRGRDLISPPNSTQGNNKNQADHDDDDDDLFGD*

Click here to download the sequence:
Link to NCBI Protein BLAST