Transcript Information: R_Transcript_108208.p1


Annotated TAIR IDAT5G41370.1
Annotated Gene NameHomolog of xeroderma pigmentosum complementation group B 1
Annotated Gene Symbol(s)XPB1, ATXPB1
Annotation TypeOrtholog
Chromosome Positionchr5:16551337-16555792 | Forward length=767
E-Value9.1E-113
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9022237992673
Replicate 23.5993657856511
Replicate 36.5447821703293
Condition 2: 8 Hour
Replicate 15.8766075873389
Replicate 26.261046915532
Replicate 39.7500079903793
Condition 3: 24 Hour
Replicate 14.853936385286
Replicate 23.780901524099
Replicate 35.7533395176987


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108208.p1 GENE.R_Transcript_108208~~R_Transcript_108208.p1 ORF type:internal len:175 (-),score=36.25,ERCC3_RAD25_C|PF16203.1|3.4e-78,Helicase_C|PF00271.27|4.1e-11,Helicase_C|PF00271.27|3.8e+03 R_Transcript_108208:1-522(-)
ATTATTGTCTTTGCTGATAATCTTTTTGCACTCACTGAGTATGCTATGAAGCTTCGGAAGCCTATGATTTATGGTGCCACCAGCCATGTGGAGAGAACTAAAATATTGGAGGCCTTCAAAACTGGAAAGGATGTTAACACTATATTCCTGTCAAAGGTTGGTGATAACTCAATAGATATACCCGAAGCAAATGTAATAATCCAAATTTCATCACATGCTGGTTCAAGGCGTCAAGAAGCCCAACGACTTGGTCGTATTCTTAGGGCAAAGGGTCGAATTGAAGATAGGATGGCTGGGGGAAAAGAGGAGTATAATGCCTTCTTTTATTCCCTTGTATCTACAGATACACAGGAGATGTATTACTCAACTAAAAGGCAACAATTCTTGATTGACCAAGGTTACAGCTTTAAGGTCATAACGAGTTTACCACCTCCTGACGAGTTGCCTAATCTCAGCTACTACAAGCTTGACGAGCAGCTAGCTCTTCTTTCAAAGGTACTGAATGCTGGGGATGATGTCGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108208.p1 GENE.R_Transcript_108208~~R_Transcript_108208.p1 ORF type:internal len:175 (-),score=36.25,ERCC3_RAD25_C|PF16203.1|3.4e-78,Helicase_C|PF00271.27|4.1e-11,Helicase_C|PF00271.27|3.8e+03 R_Transcript_108208:1-522(-)
IIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILEAFKTGKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRIEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDELPNLSYYKLDEQLALLSKVLNAGDDVV

Click here to download the sequence:
Link to NCBI Protein BLAST