Transcript Information: R_Transcript_108259.p1


Annotated TAIR IDAT1G03440.1
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:852681-853874 | Forward length=397
E-Value2.4E-207
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4422215134301
Replicate 26.0679845192882
Replicate 35.8585006639776
Condition 2: 8 Hour
Replicate 13.6321743400006
Replicate 23.8316600597428
Replicate 33.5746138561887
Condition 3: 24 Hour
Replicate 15.6366994727867
Replicate 24.4561776275079
Replicate 37.8370298111653


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108259.p1 GENE.R_Transcript_108259~~R_Transcript_108259.p1 ORF type:3prime_partial len:391 (+),score=24.77,LRR_4|PF12799.3|72,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|1,LRR_4|PF12799.3|1.3e+02,LRR_4|PF12799.3|3.8,LRR_4|PF12799.3|0.12,LRR_4|PF12799.3|2.9e+02,LRR_8|PF13855.2|0.00021,LRR_8|PF13855.2|0.23,LRR_8|PF13855.2|0.0087,LRR_8|PF13855.2|0.16,LRR_8|PF13855.2|79,LRR_8|PF13855.2|0.85,LRR_1|PF00560.29|7.1e+02,LRR_1|PF00560.29|0.062,LRR_1|PF00560.29|1.9e+03,LRR_1|PF00560.29|6.5,LRR_1|PF00560.29|49,LRR_1|PF00560.29|35,LRR_1|PF00560.29|18,LRR_1|PF00560.29|1.6e+04,LRRNT_2|PF08263.8|4.3e-08 R_Transcript_108259:218-1387(+)
ATGGAGTTGAAGAAGAAGATGTGGGTTTACATATTGGTGTGGTTGCAATGTTGGTGGATATCAATGGCGATACTTGACCCACTTGATTTTCTGGCATTGCAATCGATTCGAAAGGCATTAGACGACGTATCCGGGTCGAAATTCTTCGAGTCCTGGGATTTTACATCCGACCCGTGTAATTTCCCCGGAGTTTACTGTGATTCCAATCGGGTTATTGCTCTCAATCTTGGTGACCCGAAAGCCGGTTCACCCGGTTTGAAGGGTAGGATTGATCCGGCTATTGGGAAGTTATCAGCTCTGGCAGAGTTCACCATTGTTCCGGGTCGGATCATGGGTCGGATCCCTGAAACGGTTTCTCAGTTGTCTAATCTTCGGTTCTTTGCTGTGAGCCGGAACTTTCTTTCGGGTGATATTCCTGCTGGTTTGGGTCAGTTGAGACAGTTGCGTACTCTTGATTTGAGCTATAATCAGCTCACCGGTTCAATCCCTTGGCCACTCGGTTCACTTCCGGTTCTCTCTAACCTCATTCTCTGCCATAACCATCTCAGTGGTTCGCTCCCTCCTTTTAGTTCTCAGTCATTGGTTCGGGTCGATTTGATGCACAACAATCTCACCGGTTCGATTGAACCTGATTCTCTCCCACCTTCAGTTCACTACCTCTCTCTTGGTTGGAACAAATTCAGCGGTCCGGTTTTCCGACTACTGCCCCGGTTGAACAAGTTAAACTATCTCGACTTGAGTATGAACCAGTTCACCGGTCTAATCCCATCTGAGATATTTTCATTCCCCATCACCAACCTACAACTCCAAAGAAACCAGTTCTTTGGGCCGGTCCAACCGGGTGAGCAAGTGACAATCGAAACCGTTGATTTGAGCTACAACAGGCTATCAGGTCAGATATCACCAATGCTGTCAACGGTTCAGAATCTTTATCTGAATAATAATCGGTTCATGGGATTAGTTCCGGCCAGCATAGTGAACCGGTTGTTGGATTCCACAATACAAACGTTGTATTTGCAGCATAATTATCTAACGGGAATAGAGATAAATCCAACGGCTGAGATTCCTCTAAGTAGCTCCTTATGTTTGCAGTACAATTGCATGGTCCCACCGGTTCAGTCCGCTTGCCCGTTAAAAGCTGGTTATGAGAAAACACGCCCAACTGCACAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108259.p1 GENE.R_Transcript_108259~~R_Transcript_108259.p1 ORF type:3prime_partial len:391 (+),score=24.77,LRR_4|PF12799.3|72,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|1,LRR_4|PF12799.3|1.3e+02,LRR_4|PF12799.3|3.8,LRR_4|PF12799.3|0.12,LRR_4|PF12799.3|2.9e+02,LRR_8|PF13855.2|0.00021,LRR_8|PF13855.2|0.23,LRR_8|PF13855.2|0.0087,LRR_8|PF13855.2|0.16,LRR_8|PF13855.2|79,LRR_8|PF13855.2|0.85,LRR_1|PF00560.29|7.1e+02,LRR_1|PF00560.29|0.062,LRR_1|PF00560.29|1.9e+03,LRR_1|PF00560.29|6.5,LRR_1|PF00560.29|49,LRR_1|PF00560.29|35,LRR_1|PF00560.29|18,LRR_1|PF00560.29|1.6e+04,LRRNT_2|PF08263.8|4.3e-08 R_Transcript_108259:218-1387(+)
MELKKKMWVYILVWLQCWWISMAILDPLDFLALQSIRKALDDVSGSKFFESWDFTSDPCNFPGVYCDSNRVIALNLGDPKAGSPGLKGRIDPAIGKLSALAEFTIVPGRIMGRIPETVSQLSNLRFFAVSRNFLSGDIPAGLGQLRQLRTLDLSYNQLTGSIPWPLGSLPVLSNLILCHNHLSGSLPPFSSQSLVRVDLMHNNLTGSIEPDSLPPSVHYLSLGWNKFSGPVFRLLPRLNKLNYLDLSMNQFTGLIPSEIFSFPITNLQLQRNQFFGPVQPGEQVTIETVDLSYNRLSGQISPMLSTVQNLYLNNNRFMGLVPASIVNRLLDSTIQTLYLQHNYLTGIEINPTAEIPLSSSLCLQYNCMVPPVQSACPLKAGYEKTRPTAQ

Click here to download the sequence:
Link to NCBI Protein BLAST