Transcript Information: R_Transcript_108270.p1


Annotated TAIR IDAT2G05120.1
Annotated Gene NameNucleoporin, Nup133/Nup155-like
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:1842069-1846858 | Reverse length=1285
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.466201035923
Replicate 29.7782318442142
Replicate 311.047710671844
Condition 2: 8 Hour
Replicate 19.5028036532263
Replicate 210.329480458664
Replicate 314.184792926406
Condition 3: 24 Hour
Replicate 113.459814636891
Replicate 211.268625115155
Replicate 315.454995698284


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108270.p1 GENE.R_Transcript_108270~~R_Transcript_108270.p1 ORF type:complete len:1327 (+),score=308.66,Nucleoporin_N|PF08801.7|5.4e-38,Nucleoporin_C|PF03177.10|1.8e-08,Nucleoporin_C|PF03177.10|4.5 R_Transcript_108270:239-4219(+)
ATGTTCTCACCAGCGGCAAGGAAGCAATCCAGGCAAAGCGCTGTCAAAAATCGAAATGCCAGCCATAAAATGCTTTTAGATTCTTCACCGGTAACTCCGTCAGTAGACCTTCGGAAATCGTCTTTCGATAATAATAATCCGATCGCCAATCGCCCCAAAACCGGCACTCCTGCTCCTTGGGCCTCTCGTTTATCGGTTCTTGCCAGAATTCCTCCATCAAAGAAAAGTGAAACAGTAGATGATAGAGATGCAGTGGAGCCTGTGTATGTTGGAGAGTTTCCACAAGTTGTTCATGATGAACAAACTAAATTTCTGCGGAAATGTGTGCCAGGTGAAGCATGTATTGCAGGCGGAATGGACAAGGAAACTGCTTTGTCTTGGATGATTTGCGGAAGCAAACTTTTTATCTGGAGTTACCTATCACCTGCTGCTTCAAAGAAGTGTGTGGTTCTTGATCTTCCTTCTGATGATTCGCAAGTTAGCAATAACAATGCTTTTCTTGGTGATAATTGGTTGCTTTGTGTAATAAATCGGGACAATATTTACCAGAGCAACAATATACTGAGGCAGTTGACATCAGCTGGAGTTGTTCTATGCAACCAGAAAACTCGAGCTATCATATTCTGGCCTGACATCTATTCAGATGATGGGGTAATTCCAGTTGTCAGTTTTGCATCTTCTCAAGAGCTGGAAATTGATTCACCTGGGCACGGTAAGAGTCCTTCAAGCAAACTGCAACCAAACAATAGGCATGAAAGCATATCAAATGAACCGTGTTCATTTAACTCCTTGATTGCTTGTGCAATCCCTTCCGATCATCATCATCACCGTGTTTGTGTTGCCCTTGCTACTAGTTCTAATGGTGAACTCTGGAAATTCTGTTGCACTCCCACTGGAATTCATCGTCAGAACATATCTCCTTTTGGTGGATGCAATCTATCTTCAGGGACTAACGGCTACCCTAGATCTCTTATTTGGCGTTTTCCATCTTGCTTGACAGGAGAGGCAAATAGGCAATTTTTCCTAGTAAATGACCATGAAATACAGTGTTTTTCCATTCAACTTTCAGCTAAACTAGACGTGACAAAAGTCTGGTCCCATGAATTCATTGGCACTGATAATGATCTAGGTATCAAGAAAGACTTAGCCGGTCAGAAGAGGATCTGGCCGTTGGATATTCAGGTAGATGAACGTGGTAAAGAAATTACCATCCTTGTTGCCATATATTGTAATGACCGAGTAAGCAGTTCAAGCTACACCCAGTATTCTCTTCTGACGATGCGGTATAAACCTGGTGTAGATGAAACTTCTAACAACTTTATGCATGGAGGTGTGTTGGAGAAGAAGGCTCCTGTACAGGTATTAATTCCAAAAGCAAGGGTGGAAAAAGAGGGATTCTTGTTTTCTATGAGATTGAGAGTTGGAGGCAAGCCTTCAGGATCTGCCATCATACTCTCTGGAGATGGAACTGCCACTGTCTCCTGTTTCTGGAGAAATTCAACCAGGCTTTACCAATTTGATCTGCCTTATGATGCTGGGAAGGTGCTTGATGCATCAGTTTTCCCTACTACAGATGACAGTGAGGAGGGTGCATGGGTTGTATTAACTGAGAAAGCTGGAGTGTGGGCAATACCGGAGAAGGCTGTTTTATATGGTGGAGTTGAACCACCAGAGCGAAGTTTGTCACGCAAAGGGAGCTCAAATGGAAGGTCTTCTGAAGAGGAGAAGAAAATAGGTTCAATTGCAGAAAACTTTTCACCTGGAAACACTAGTGTTGATGCTCGTGATATTGTTAGCAAACAGAGGCCTGGTTTAACCGGGATTGCGTCCAGAACTGCTCAGGATGAAGAGGCAGAGGCTTTATTAAATCGTCTGTTTAATGATTTTCTTCTGTCAGGCCAGGTGGATGGATCTCTAGAGAAGCTAATGAATGTGCGGGCTTTTGAAAGGGATGGAGAAACTAATGCATTTGCTCGGGTAAGCAAATCAATTGTTGACACCTTAGCTAAGCATTGGACAACAACCAGAGGTGCTGAGATTGTTGCCTTAGCCATAGTATCGAACCAGCTAACAGAGAAGCAACAGATACATGAAAAATTTCTCCAGTTTCTTGCTTTATCCAAGTGCCATGAAGAACTATCTATGAAACAGAGACACGCGTTGCAAATCATATTGGAACATGGTGAAAAGCTCCTTGGCATAATTCAGCTTAGGGAACTACAAAACATTATCAGCCAGAACCGTTTTGGTGGAGTCAGTTCCCAGCATTCAAGCTTGGAAAGAGAAACTTCAGGTTCTTTATGGGATTTGATTCAGATAGTTGGTGAGACTGCCCGCAGAAATGCTGTTCTGCTGATGGATAGGGATAATGCAGAAGTGTTCTACAGCAAAATTTCTGATCTTGAACAAGTGTTTTATTGCTTGGACAGGCACTTGAATTATATTATCAGTGTGGAGCAGCCACTTAAGATTCAGGTTCAGAGAGCTTGTGAACTTTCTAAAGCTTGTGTTACACTAGTCCGCAGTGCCATGCACTACAAAAACGAGCACCACATGTGGTATCCACCTCCTGATGGCTTGGCACCATGGTATTGCCAGCGTGTTGTGCGTGATGGGCTCTGGAGTGTTGCTTCTCTCATGATTAAGACTCTGGATGATTCTACTGGAATTTTAATATCTTCTAAGTCAGATATATGCTCCAATCTGGAAGTGCTAGCTGATGTTGTACTAGAGGCATATGTCGGTGCCATTACTGCAAAAATAGAGCGTGGGGAAGAACATAAGGGCCTCTTAGAAGAATATTGGAAAAGAAGGGATGACCTTCTTGACTCTCTATACCAACAGATCAAAGTATTTGTCAATGCTAGATGCCAGGATTCTGTTGGTGAGAATGGAGAACAGAAGGAAGTGATCCTCAGAGAACTGTCATCTAATCTGTTGTCTGTTGCAAGGCGGCATGAAGCATACCAGACTCTTTGGAATATCTGCTGTGACCTGAATGATTCCACGCTCCTTAAAGAGCTTATGCATGAAAGCTTGGGACCAAGGGGAGGATTCAGTTATTTTGTGTTTGAGCAATTATATGAGAACAAACAATTTTCAAAGCTTTTGAGGCTAGGGGAAGAGTTCCCACAAAAGCTGGTTACCTATCTGAAGGATCACAAGAATCTTATGTGGCTTCATGAGATATATCTTCATCAGTATTCTGCTGCTTCAAAAACTCTTCACGCTTTAGCACTTTCTGAAGATGGAAAATGGTTTCCTTCTACTGGGATGGAAGCAGAAGCAGACTCAGGAAAAGCGGAACTAACATTGCCAGAAAGGAGGTGTCTCTTACATCTCTCAAAAATAGCTGCAGTTGCAGGCAAAGATGCTGCTTTTGAGGCAGAACTTGCACGCATTGATGCGGACTTGAAGATTTTGAAGTCACAGGAGGATATATTGAAACTACTTCCTGATGACATGGACCAGCCACAAATTACAGAGCAGATTCTCCCCCCTTGGGATCTCATCAAATTGTGCCTGAAAGGTCAAACTCCAGAGCTACTGTTGAGGGCTTTTGATGTGTTTGCTTGGACGAGTTCTTCTTTCCGAAGATCCAATAAATCACTTTTGGAAGAGTGTTGGAAATGTGCGGTTGATCAGGATGACTGGGAGAAGCTCTATCAGTTCTCCGTTGCTGAAGGATGGAGTGATGAGGATACTTTACGGGTTCTGGAAAAAACTCTCCTTTTCCAGGCAACAAGGAGATGTTATGGTACAGAATCAGAAACGTACGATGGTGGTTTCAATGAAGTTCTGCCATTGCGGCGAGAGAGCATCGAGCTTCAGGGTATGAAGGATTCTGATTCCTCCATCGAAGCAATTTTGATGCAGCATAAAGACTTCTCAGATGCTGGAAAGCTGATGCTGACTGCAGTCAACTTGGCCACTGCCCAAGTTGATATCGGCGAGGAAGATGGGCCTATTCCAATGGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108270.p1 GENE.R_Transcript_108270~~R_Transcript_108270.p1 ORF type:complete len:1327 (+),score=308.66,Nucleoporin_N|PF08801.7|5.4e-38,Nucleoporin_C|PF03177.10|1.8e-08,Nucleoporin_C|PF03177.10|4.5 R_Transcript_108270:239-4219(+)
MFSPAARKQSRQSAVKNRNASHKMLLDSSPVTPSVDLRKSSFDNNNPIANRPKTGTPAPWASRLSVLARIPPSKKSETVDDRDAVEPVYVGEFPQVVHDEQTKFLRKCVPGEACIAGGMDKETALSWMICGSKLFIWSYLSPAASKKCVVLDLPSDDSQVSNNNAFLGDNWLLCVINRDNIYQSNNILRQLTSAGVVLCNQKTRAIIFWPDIYSDDGVIPVVSFASSQELEIDSPGHGKSPSSKLQPNNRHESISNEPCSFNSLIACAIPSDHHHHRVCVALATSSNGELWKFCCTPTGIHRQNISPFGGCNLSSGTNGYPRSLIWRFPSCLTGEANRQFFLVNDHEIQCFSIQLSAKLDVTKVWSHEFIGTDNDLGIKKDLAGQKRIWPLDIQVDERGKEITILVAIYCNDRVSSSSYTQYSLLTMRYKPGVDETSNNFMHGGVLEKKAPVQVLIPKARVEKEGFLFSMRLRVGGKPSGSAIILSGDGTATVSCFWRNSTRLYQFDLPYDAGKVLDASVFPTTDDSEEGAWVVLTEKAGVWAIPEKAVLYGGVEPPERSLSRKGSSNGRSSEEEKKIGSIAENFSPGNTSVDARDIVSKQRPGLTGIASRTAQDEEAEALLNRLFNDFLLSGQVDGSLEKLMNVRAFERDGETNAFARVSKSIVDTLAKHWTTTRGAEIVALAIVSNQLTEKQQIHEKFLQFLALSKCHEELSMKQRHALQIILEHGEKLLGIIQLRELQNIISQNRFGGVSSQHSSLERETSGSLWDLIQIVGETARRNAVLLMDRDNAEVFYSKISDLEQVFYCLDRHLNYIISVEQPLKIQVQRACELSKACVTLVRSAMHYKNEHHMWYPPPDGLAPWYCQRVVRDGLWSVASLMIKTLDDSTGILISSKSDICSNLEVLADVVLEAYVGAITAKIERGEEHKGLLEEYWKRRDDLLDSLYQQIKVFVNARCQDSVGENGEQKEVILRELSSNLLSVARRHEAYQTLWNICCDLNDSTLLKELMHESLGPRGGFSYFVFEQLYENKQFSKLLRLGEEFPQKLVTYLKDHKNLMWLHEIYLHQYSAASKTLHALALSEDGKWFPSTGMEAEADSGKAELTLPERRCLLHLSKIAAVAGKDAAFEAELARIDADLKILKSQEDILKLLPDDMDQPQITEQILPPWDLIKLCLKGQTPELLLRAFDVFAWTSSSFRRSNKSLLEECWKCAVDQDDWEKLYQFSVAEGWSDEDTLRVLEKTLLFQATRRCYGTESETYDGGFNEVLPLRRESIELQGMKDSDSSIEAILMQHKDFSDAGKLMLTAVNLATAQVDIGEEDGPIPME*

Click here to download the sequence:
Link to NCBI Protein BLAST