Transcript Information: R_Transcript_108310.p1


Annotated TAIR IDAT1G02080.1
Annotated Gene Nametranscription regulators
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:373335-386682 | Forward length=2431
E-Value1.3E-295
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3817837398291
Replicate 21.5460458738842
Replicate 32.475668790083
Condition 2: 8 Hour
Replicate 12.6754151723831
Replicate 22.6556866794757
Replicate 34.6995856475586
Condition 3: 24 Hour
Replicate 14.3352628850415
Replicate 22.3312565810705
Replicate 33.7692603083137


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108310.p1 GENE.R_Transcript_108310~~R_Transcript_108310.p1 ORF type:3prime_partial len:842 (+),score=164.02,CNOT1_TTP_bind|PF16417.1|4.5e-72,CNOT1_HEAT|PF16418.1|1.6e-32 R_Transcript_108310:317-2839(+)
ATGCAGGAATTCTCGTCGACGGTGGCCGGACATATCCGGTTTCTTCTCCAAAGCTTGAACGGATCCAATTCTGACTCCTTGCTTCAAGACCTCTGCCAGTTCACTGATTATGGGTTGGAAGGAAGCATTCTGCTCATCCAGAGTTGTTTGGAGCACATCAATATTTATGGGACAGAAGTTAAGAATGCACAGGTGCACCCAGTTATTGGCTCACTGTTCAGATATATTCTGGATAAACAAAACTTCAGTACAGTTTTCTGTCAATCTCTAAGAAACTTGACAATGAGAGATGGATTCCTTGATGATTTATCAAAGGCCCTTGGTCTGTCACTTTGTGAAAAAATTGCAATTGGTCTTGCATTATCAGATTCAGATGATCCTGATACTAGACTGAATGGGACAAACTTCTGCATGACTCAGATTGAGGTGTTGTTTGCTAATCCCAGTACCAACAGCTCAACTGAGCAAATCCAGATTATTTTCATGTTCCTTCATCGATGTGAGGGCCTTTCAAAGCATGTAGATACTTTTACTCAGATGCTGAGCTTAATGCGGTTGAAAGAGAGTATCCCATTTGTGCTAGCTCCATTGCTCCCCGATGAACTGAACGACACCAAATTCTTGAGGAGTATGGACTTGTTTTATGGTTCTGATGAAAATGACTTTGATGCTATTGTTGCTGAAATGGAAAAGGAGATCAGTATGGCAGATGTTGTGAAGGAGCTGGGTTACGGATGCACGGCTGATGCCTCAAAATGCAAGGAAATTTTGTCTCTTTATTTACCACTTACTGAAGTAACTATTGCTAGGATCTTGGGCACGGTTGTCCGCACTCATGCTGGTCTTGAAGACAACACGACCACATTTTCAGCATTTCTTTCAGGAATCGGTGGTAATCCCATATCTGATCTACCATCTTTGAGCTCCTGGAACGTTGATGTACTTGTCGATTCAATCAAACAGCTTGCCCCTGATACCAACTGGGTTAGAGTTATGGAGGACCTGGACCATGAGGGCTTCTACATTCCTAGTGAGGATGCCTTCACATTTTTCATGACCATTTACAAGCATGCCTGCCAGGACTCCTTTCCCCTCCATGCCATTTGTGGGTCGATTTGGAAGAATTCTGAAGGGCAGTTGTCCTTTCTTAAGTATGCTGTATCAGCCCCACCTGAATTGTTTACCTTTTCACACTCTGTGAGGCAACTGGCATATGTTGATGCAGTCCATGGTTTAAAATTTCAACTTGGACAATCCAATCATGCTTGGCTGTGTCTTGATCTTTTGGATGTATTATGCCAACTGGCTGAGAGAGGTCATGCTGCTGCAGTGCAGTCAGTGCTTGAATTTCCTCTTAAGCACTGCCCTGAAGTATTGCTCCTTGGAATGGCACAGATCCATACAACATATGATCTCCTTCAGCATGAAGTCTCTTCTACTGTGCTTCCAGTGATAATTGATAATGCCAGCAGAAAAGGACTTATTCTTCACCTCTGGCACATCAATCATTATTTGGTGTTGCGTGGGTTTGTTGATGTTCTAGCTAAAGATTCAGACAACATTCACAGAATTTTAGATATTTGCCAGGAGACAAAGATTCTCAACCATGTCTTAGAGAGGATTCCTTTCTCTTTTGCCATCAGACTAGCAGTTGATGCTTCCCAAAAGGAACTTTTAGATCTTGAAAAATGGTTGAGTGACAATATTGTTACGAGTAAAGACTCCTTTTTTGAGGAGTGCCTCAAGTATCTGAAAGATATTCAGGGCCGAACTGCCGTGGAGGATAATGCTAACAGGCTTCATCAAACTGGCGCAGCTGCTAATCTTCACTCCTCGACTGCTTTAATCATCTTAAAGACCCTTCAAGCTAATGCTCGAACCCTTACAACAAAGAGTATCTCTGATGAAATTGAAAAGCTGCAGACGTCTCTGGGGCATGGTGGTCTGGGTCAGCAGACTGATGGAGTTAATGATTCATCAACCTCAAATACATATTCTGAGGATATCGAGGCAGAGGCAAATTCTTACTTCCAGCGGATGTTTTCTGAACAGCTGACTATTGATGAGATGGTCCAAATGCTTTCTCGCTTCAAAGAATCCTCTGAGAAAAGGGAAAAGTCCATTTTTGAGTGCATGATTTCCAATCTTTTCGAAGAGTATAGGTTCTTTCCTAAATACCCAGAAAGACAGCTTGGACTTGCAGCTGTATTATTTGGTTCTATCATCAAGCATCAGTTGGTAACTCATCTCACCCTCGGAATTGCTCTTCGCTGTGTTCTTGATGCATTGCGTAAGCCTGCTGATTCAAAGATGTTTGCATTTGGTACCAAGGCCTTGGAGAAGTTTGTCAACCGTTTAGATGAATGGCCTCAATACTGCAACCATATCTTACAGATATCTCACCTTCGTAATACTCACCCGGAACTTGTTGTATATATTGAAGGGGTTCTTACTCGAATATCTCATGGTGGAAATGGTCCTGTTGACCAACCTAGCATTTCTACTATAGCGACACCGATCACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108310.p1 GENE.R_Transcript_108310~~R_Transcript_108310.p1 ORF type:3prime_partial len:842 (+),score=164.02,CNOT1_TTP_bind|PF16417.1|4.5e-72,CNOT1_HEAT|PF16418.1|1.6e-32 R_Transcript_108310:317-2839(+)
MQEFSSTVAGHIRFLLQSLNGSNSDSLLQDLCQFTDYGLEGSILLIQSCLEHINIYGTEVKNAQVHPVIGSLFRYILDKQNFSTVFCQSLRNLTMRDGFLDDLSKALGLSLCEKIAIGLALSDSDDPDTRLNGTNFCMTQIEVLFANPSTNSSTEQIQIIFMFLHRCEGLSKHVDTFTQMLSLMRLKESIPFVLAPLLPDELNDTKFLRSMDLFYGSDENDFDAIVAEMEKEISMADVVKELGYGCTADASKCKEILSLYLPLTEVTIARILGTVVRTHAGLEDNTTTFSAFLSGIGGNPISDLPSLSSWNVDVLVDSIKQLAPDTNWVRVMEDLDHEGFYIPSEDAFTFFMTIYKHACQDSFPLHAICGSIWKNSEGQLSFLKYAVSAPPELFTFSHSVRQLAYVDAVHGLKFQLGQSNHAWLCLDLLDVLCQLAERGHAAAVQSVLEFPLKHCPEVLLLGMAQIHTTYDLLQHEVSSTVLPVIIDNASRKGLILHLWHINHYLVLRGFVDVLAKDSDNIHRILDICQETKILNHVLERIPFSFAIRLAVDASQKELLDLEKWLSDNIVTSKDSFFEECLKYLKDIQGRTAVEDNANRLHQTGAAANLHSSTALIILKTLQANARTLTTKSISDEIEKLQTSLGHGGLGQQTDGVNDSSTSNTYSEDIEAEANSYFQRMFSEQLTIDEMVQMLSRFKESSEKREKSIFECMISNLFEEYRFFPKYPERQLGLAAVLFGSIIKHQLVTHLTLGIALRCVLDALRKPADSKMFAFGTKALEKFVNRLDEWPQYCNHILQISHLRNTHPELVVYIEGVLTRISHGGNGPVDQPSISTIATPIT

Click here to download the sequence:
Link to NCBI Protein BLAST