Transcript Information: R_Transcript_108376.p1


Annotated TAIR IDAT1G21550.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7553317-7553784 | Reverse length=155
E-Value5E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 181.112877051587
Replicate 271.363830066631
Replicate 374.382552418967
Condition 2: 8 Hour
Replicate 125.036109103363
Replicate 232.661962239934
Replicate 343.237544399124
Condition 3: 24 Hour
Replicate 122.312925002207
Replicate 228.498368229398
Replicate 327.052219275941


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108376.p1 GENE.R_Transcript_108376~~R_Transcript_108376.p1 ORF type:complete len:178 (+),score=43.26,EF-hand_1|PF00036.28|3.4e-05,EF-hand_1|PF00036.28|1.8e+03,EF-hand_1|PF00036.28|4e+02,EF-hand_1|PF00036.28|2.9e-07,EF-hand_1|PF00036.28|5.9e-08,EF-hand_5|PF13202.2|0.0019,EF-hand_5|PF13202.2|3.9e+03,EF-hand_5|PF13202.2|8.6e+02,EF-hand_5|PF13202.2|6.8e-08,EF-hand_5|PF13202.2|0.00018,EF-hand_6|PF13405.2|0.00065,EF-hand_6|PF13405.2|1.3e+04,EF-hand_6|PF13405.2|3.3e-06,EF-hand_6|PF13405.2|0.0012,EF-hand_7|PF13499.2|0.0032,EF-hand_7|PF13499.2|1.1e-06,EF-hand_7|PF13499.2|5.2e-08,EF-hand_8|PF13833.2|0.033,EF-hand_8|PF13833.2|4.1e+02,EF-hand_8|PF13833.2|0.043,EF-hand_8|PF13833.2|0.033 R_Transcript_108376:300-833(+)
ATGCCTTCATATCATAATCACCTTCTTGTTAACTCTCCTAAGATTTATGTCACCATGTCTCCTCTTGAAAACGTGGATTTGGACCGGATTTTCGAGTCGCTTGACCAAAATGGTGATGGGCTATTGAGCCTTGATGAGCTTCATTGGCTCCTAGAGAGAACTAATGTTCATGTCAACCATGAAGAGCTTGTTTCCTTGGTGGGTGAAGATGGGCTAAACTTTGATGAGTTCTCCACTTTTTATGAATCAATATTATTGAAGAGCAAGAAAAATAGTGGAGATTTGAGTTCAAATAATGGTGATTTTGACCAAGATGAAGAGGAAGATAGTGATTTGTATAAGGCATTTAAGGTGTTTGATTTGGATGGTGATGGGCTCATCTCATCCCAAGAGCTTCAAAGAGTGCTTTGGAGATTAGGGATGTGGGATTGCAAGAATGGGCTTGATGTTGATAGAATTATCCGTAAGTATGATGTTAATAGTGATGGGTTCGTAGATTTCCATGAGTTTAAGAGTATGATGCTTGCCCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108376.p1 GENE.R_Transcript_108376~~R_Transcript_108376.p1 ORF type:complete len:178 (+),score=43.26,EF-hand_1|PF00036.28|3.4e-05,EF-hand_1|PF00036.28|1.8e+03,EF-hand_1|PF00036.28|4e+02,EF-hand_1|PF00036.28|2.9e-07,EF-hand_1|PF00036.28|5.9e-08,EF-hand_5|PF13202.2|0.0019,EF-hand_5|PF13202.2|3.9e+03,EF-hand_5|PF13202.2|8.6e+02,EF-hand_5|PF13202.2|6.8e-08,EF-hand_5|PF13202.2|0.00018,EF-hand_6|PF13405.2|0.00065,EF-hand_6|PF13405.2|1.3e+04,EF-hand_6|PF13405.2|3.3e-06,EF-hand_6|PF13405.2|0.0012,EF-hand_7|PF13499.2|0.0032,EF-hand_7|PF13499.2|1.1e-06,EF-hand_7|PF13499.2|5.2e-08,EF-hand_8|PF13833.2|0.033,EF-hand_8|PF13833.2|4.1e+02,EF-hand_8|PF13833.2|0.043,EF-hand_8|PF13833.2|0.033 R_Transcript_108376:300-833(+)
MPSYHNHLLVNSPKIYVTMSPLENVDLDRIFESLDQNGDGLLSLDELHWLLERTNVHVNHEELVSLVGEDGLNFDEFSTFYESILLKSKKNSGDLSSNNGDFDQDEEEDSDLYKAFKVFDLDGDGLISSQELQRVLWRLGMWDCKNGLDVDRIIRKYDVNSDGFVDFHEFKSMMLAH*

Click here to download the sequence:
Link to NCBI Protein BLAST