Transcript Information: R_Transcript_108386.p1


Annotated TAIR IDAT1G43760.1
Annotated Gene NameDNAse I-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16528880-16531065 | Reverse length=626
E-Value4E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73320561974557
Replicate 20.24414302809649
Replicate 30.38742896568545
Condition 2: 8 Hour
Replicate 10.75062376688172
Replicate 20.52002050793455
Replicate 30.78669771187724
Condition 3: 24 Hour
Replicate 10.80085374050131
Replicate 20.48959877029823
Replicate 30.50901638806738


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108386.p1 GENE.R_Transcript_108386~~R_Transcript_108386.p1 ORF type:complete len:946 (+),score=55.24,RVT_1|PF00078.23|2.4e-41,Exo_endo_phos|PF03372.19|4.4e-10,Exo_endo_phos|PF03372.19|6.1e+03 R_Transcript_108386:70-2907(+)
ATGAAGTTCATATGCAGGATGGAGATTCTGATACGAGCCCAGGAGGCTCGCAACATGCTAGCTGAAGTTTTTGGCTACAGCCCCCTAGTGGGATTGGTAGAGTACAATACTTTGATGACACATCTTACTTATAAGTGTTCTCTTATGAATATTCTAATCTGGAACACTAGGGGGACTGCAAGCAGAGCGTTCATGAATACGCTCAAAGAGCTTATGAGACTACACAAACCTACCATCCTGGCTCTTGTTGAAACCTGGGTAAGAGGGGAGCAAGCTGATCAAATTTGTAATCAAATTGGCTATGATGGTCGCGTTCGAGTTGAAGCTCAAGGATTTAGTGGAGGAATTTGGTTACTTTGGAATACTGATGTGGTGAGTTTGAACCTTATAGCTACTCATGCTCAACATATTACGGCTGAGGTCCAAAGGGGTGGGGAAAGGCCTTGGATTTTATCCATAATATATGGCAGCCCTAGACCAGCTACTAGGGAGGAATTATGGTCCACTTTGCGTGAATTTGCGCATACACGGAACAAGCCATGGTTACTGGCTGGAGACTTTAATGAAACAAGCTCAGTAGCGGAACGCACAGGGTCCTCCCGTGGTTTGGCGAAGCGATGTGAGCGATTCAACCAATGGATTCAAGAGCTTCATCTTATTGATCTGGGATATCAAGGCCCGTGCTTTACATGGAACCGAGGACGTACGCCCGAGACTAGAACCAGTGCTAGGTTGGATAGAGGCTTGTGTGATGATGAATGGAGAATCTTATACCCAGAAGCAGGTGTTAGACACCTCGTTGCTAATCACTCCGACCATTGCCCTTTACTCATCAGTCTAGATGGCTTTTCACCGATCAATCCTTTCGACAGACCCTTCCGGTTCCAAGCGGCATGGCTACTCCATGTGGAGTTCCATGGCTTTCTTAAAAACAAATGGCCTAAGGGTATCCCACTGGAGCACGCCCTTTCTATACTTACCAGTGAGTTACAAGAGTGGAACAAAACGGTGTTTGGCAATCTATTCCAGAGAAGAAGAAGACTTTGGGCAAGATTAGAAGGAGTACAGACTCGTCTAACAACCCAACCACATCAGGGGCTTTTGGATTTGGAGGTGTCTCTAAGACATGAGCTTAATGAAGTACTAGAGCAAATTAATGTTTTCTGGTTCCAGAAGGCACGAACTGAAATGCTCCTCGATGGCGACCGAAATACCAGATTTTTCCATGTGAGTACTTTGATCCGCCGTAAGAGAAACAGAATCGAATCGCTACAAGATGAGCAAGGCATTTGGATACAAGAACCTGAAGCACTTCAAAAGTTAGTCACAAGCCATTTTCATGCAATCTATACAGAGGATAAGTCTCCCATGCCACCTTTTAACATTCCGTCTGGACATTTCCCGTGCCTAGGCCAAGCGGACTTTGCATCGCTTGCTCGCCCTTTCTCTGGAATTGAAGTGAAGCAGGCGCTGGATGATATGAGCCCTTTCAAAGCGCCGGGTCCGGATGGCTTCCATGCAGTGTTTTATCAGCGACATTGGGAGATTGTGAAAGATGAAGTCACGACAAGGGTCTTATCAATCCTTAATGGGGCTGCCTCCCCATCTGACGTGAATGAAGCTCTTGTGGTGCTTATTCCCAAAAATAATAATCCACAAGTAGTCAACCATTTGCGGCCTATCTCGCTGTGTAATGTCGCCATGAAAATGGTCACCAAAGCCATTGTTCGTCGACTCAAAAGCATTCTATCAAAGGTCATTGAACCGACCCAAACTAGTTTTGTACCGGGTCGCAACATTACGGACAACGTGGTTATTGTGCAGGAAATTCTACATACAATGAAGATGTCCAAGGCGAAAACAGGGATGATGGCAATCAAGGTAGACTTAGAGAAGGCATATGATAGAGTCCGTTGGAGCTTTATTCGTGATACTCTGCTAAATTTGAATCTGCCCATTAATTTAGTTGAGGTGATCATGAGTTGCATTACGACAACAAAAATGAAATTTCTTTGGAATGGGTCCATGACATGCAGCTTCCAACCATCTAGGGGGGTGAGACAGGGGGATCCGCTCTCACCTTACATTTTCGTCATGTGTATGGAGCACCTCACACACATCATCAATGAGGCGGTGGCTAGGGGGGAATGGAAACCTGTAAGGGCTAGCCAAAATGGCCCCTATATTTCTCATCTTTCCTTTGCTGATGACCTTGTGCTATTGGCAGAAGCTTCAATTGGCCAAATTGACACGATCAAGCAGTGCCTTGACAGATTTTGCGAAGCCTCTGGTGAGTGTGTAAATTATAGTAAATCAAGTATATGCTTCTCTAGCGGAGTACGAAATCATCTACGAGAAGCTATTGGGGCCAAAGCCGGCATGCAGGTCGCACCAGATTTGGGGACATACCTGGGGATACCCACCACAATGGGTAGGCTCTCAAAACAACACTTTCAGCCACTTCTGGACCGCGTTCAATCCAAATTGGTTGGGTGGCGAAGCAAGTATCTTTCGCTAGCGGGCCGGATCACACTCGCACAATCAGCCCTTTCAACCGTCCCTTACTACGTGATGCAGTCTACACTCCTCCCTCGTTCGGTTTGTGATGAACTAGATAAAAAAGTAAGGGGTTTTATATGGGGCAACAGTCAGGATCAAAGGAGGATTCATTTGGTTAATTGGACTACAATTACACAGCCCAAGCGATTAGGTGGTCTTAGCTTTCGGACCATGCGACAAACGAACGCTGCGTGTTTAACTAAGCTGGGGTGGAGATCCCTAACAGAACCTCAGAGTCTGTGGTCACGCATACTGCGAAGCAAATACTGTGAAGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108386.p1 GENE.R_Transcript_108386~~R_Transcript_108386.p1 ORF type:complete len:946 (+),score=55.24,RVT_1|PF00078.23|2.4e-41,Exo_endo_phos|PF03372.19|4.4e-10,Exo_endo_phos|PF03372.19|6.1e+03 R_Transcript_108386:70-2907(+)
MKFICRMEILIRAQEARNMLAEVFGYSPLVGLVEYNTLMTHLTYKCSLMNILIWNTRGTASRAFMNTLKELMRLHKPTILALVETWVRGEQADQICNQIGYDGRVRVEAQGFSGGIWLLWNTDVVSLNLIATHAQHITAEVQRGGERPWILSIIYGSPRPATREELWSTLREFAHTRNKPWLLAGDFNETSSVAERTGSSRGLAKRCERFNQWIQELHLIDLGYQGPCFTWNRGRTPETRTSARLDRGLCDDEWRILYPEAGVRHLVANHSDHCPLLISLDGFSPINPFDRPFRFQAAWLLHVEFHGFLKNKWPKGIPLEHALSILTSELQEWNKTVFGNLFQRRRRLWARLEGVQTRLTTQPHQGLLDLEVSLRHELNEVLEQINVFWFQKARTEMLLDGDRNTRFFHVSTLIRRKRNRIESLQDEQGIWIQEPEALQKLVTSHFHAIYTEDKSPMPPFNIPSGHFPCLGQADFASLARPFSGIEVKQALDDMSPFKAPGPDGFHAVFYQRHWEIVKDEVTTRVLSILNGAASPSDVNEALVVLIPKNNNPQVVNHLRPISLCNVAMKMVTKAIVRRLKSILSKVIEPTQTSFVPGRNITDNVVIVQEILHTMKMSKAKTGMMAIKVDLEKAYDRVRWSFIRDTLLNLNLPINLVEVIMSCITTTKMKFLWNGSMTCSFQPSRGVRQGDPLSPYIFVMCMEHLTHIINEAVARGEWKPVRASQNGPYISHLSFADDLVLLAEASIGQIDTIKQCLDRFCEASGECVNYSKSSICFSSGVRNHLREAIGAKAGMQVAPDLGTYLGIPTTMGRLSKQHFQPLLDRVQSKLVGWRSKYLSLAGRITLAQSALSTVPYYVMQSTLLPRSVCDELDKKVRGFIWGNSQDQRRIHLVNWTTITQPKRLGGLSFRTMRQTNAACLTKLGWRSLTEPQSLWSRILRSKYCEG*

Click here to download the sequence:
Link to NCBI Protein BLAST