Transcript Information: R_Transcript_108386.p2


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value3E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9255870897286
Replicate 20.73833144321048
Replicate 31.2082674775992
Condition 2: 8 Hour
Replicate 10.96867158033058
Replicate 21.2286198813838
Replicate 31.6755332880357
Condition 3: 24 Hour
Replicate 11.8164418905436
Replicate 21.3572467009586
Replicate 31.6355647458341


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108386.p2 GENE.R_Transcript_108386~~R_Transcript_108386.p2 ORF type:3prime_partial len:455 (+),score=43.23,RVT_3|PF13456.2|1.6e+02,RVT_3|PF13456.2|1.5e-18,zf-RVT|PF13966.2|7.1e-18,zf-RVT|PF13966.2|2.6e+03 R_Transcript_108386:2920-4281(+)
ATGTTCCAAGCACATCAAAGAAGCTCTAATACATGGAAAGGCATGGTGGACTCCTCTATCTTTGTAAAGGAGGGAGCGAAGAGGGTTGTTGGCGATGGAAAAAGCACCTTCTTTTGGCTTCACAACTGGGTGACTAATAAGCCTCTTGAGCAGCTAGCCTTACAGCCATTAGACGAAGAAACACAATTCCAGACTGTTGATGAGTATTGGGATGGCGAACGTTGGAAGTGGGATCTTTTCTCCCATCTACTACCAACGGAAACACTCCAAGCAATAGCATCGATTTCTCTAGTTCATGGAGCTCCTGCTGCAGATAGACTCTCATGGGGACCCACGGTGTCAGGGCAATTTTCTATCAGCACCGCCCTTGACATTATACGGGGCCTGAATTCTGGAGAGCCTCAAGCTCGATGGAAAGCGATATGGAGTGTGACAGCATCACAAAGAGTTCGAACCTTTCTATGGCTCGCCATGCATGATAGCTTCTTGAGTAATGCTAACAGAGTAAGGAGACATCTAGTTGAAGATGCAGCCTGCGCGACATGTGGTCACGTTGAAGAAACTAGTCTCCATATCCTACGAGACTGCCCTGTGGCTAAAGAGGTATGGGATCCCATAATCCCCAATCATCAGGTAACCTTATTCTATACTGAATCACTGTCAAACTGGTTGGTGCGCAATATTGAATCTAATGATGAATGGGCTACTATTTTTGCCACCACACTATGGTGGATATGGCGATGGAGAAATACTCGAGTAATGGGAGACTCAAGCAAAATCCCTCCTCAGCGGCATGTGTTTGCTACCCAAAGGGGTATAGAGTACCTTGAAACAGAGTCTAAAAGGGCCAGCAAACTGTGTGGAAGCAACAAAACCACTCATGAGATCACAATTGCTTGGTCAAAACCACCGGTTGGATGGGTGAAACTTAACACTGATGGTGCTGCCAGAGGAAACCCAGGGCTCGCAGGGTGTGGTGGAATTCTTCGTTCCTCACTTGGAGCCTTTATGAAAGCCTTTGCATTCAAATTAGGACGCACTACGGCGCTACATGCAGAACTCACGGCAATTTTCCATGGACTTCAAATGGCTCGACGGCTACAAGTACCACAGTTGATCCTTGAAGTTGACTCCGAGGTGGCCCTTAACATGCTTAAAACCGAGATCCCGTCTTATTGCCCCTATTACTACCTGTTGCGCAATTGCAAAGATCTACTTCATAGCCCTGATTGGAAGGTCAAAATCAACCATGTTTATCGCGAAGCAAATAGGGCTGCTGATTGGTTCGCAAATTGGAGCTTTACGATGGAACACCCTCTTACTGAGTTTGATTTCCCTCCCCCTAGTGTAATGGCAGTGCTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108386.p2 GENE.R_Transcript_108386~~R_Transcript_108386.p2 ORF type:3prime_partial len:455 (+),score=43.23,RVT_3|PF13456.2|1.6e+02,RVT_3|PF13456.2|1.5e-18,zf-RVT|PF13966.2|7.1e-18,zf-RVT|PF13966.2|2.6e+03 R_Transcript_108386:2920-4281(+)
MFQAHQRSSNTWKGMVDSSIFVKEGAKRVVGDGKSTFFWLHNWVTNKPLEQLALQPLDEETQFQTVDEYWDGERWKWDLFSHLLPTETLQAIASISLVHGAPAADRLSWGPTVSGQFSISTALDIIRGLNSGEPQARWKAIWSVTASQRVRTFLWLAMHDSFLSNANRVRRHLVEDAACATCGHVEETSLHILRDCPVAKEVWDPIIPNHQVTLFYTESLSNWLVRNIESNDEWATIFATTLWWIWRWRNTRVMGDSSKIPPQRHVFATQRGIEYLETESKRASKLCGSNKTTHEITIAWSKPPVGWVKLNTDGAARGNPGLAGCGGILRSSLGAFMKAFAFKLGRTTALHAELTAIFHGLQMARRLQVPQLILEVDSEVALNMLKTEIPSYCPYYYLLRNCKDLLHSPDWKVKINHVYREANRAADWFANWSFTMEHPLTEFDFPPPSVMAVL

Click here to download the sequence:
Link to NCBI Protein BLAST