Transcript Information: R_Transcript_108453.p1


Annotated TAIR IDAT2G28105.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Replication factor A, C-terminal (InterPro:IPR013955); Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11976764-11977713 | Forward length=166
E-Value4.3E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.821865903315
Replicate 26.3097690370222
Replicate 37.0025778143678
Condition 2: 8 Hour
Replicate 15.8360092620377
Replicate 26.2564125358758
Replicate 38.9347306162527
Condition 3: 24 Hour
Replicate 110.110951369714
Replicate 29.1420762240735
Replicate 310.660332852686


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108453.p1 GENE.R_Transcript_108453~~R_Transcript_108453.p1 ORF type:5prime_partial len:193 (+),score=27.16,Rep_fac-A_C|PF08646.6|2.1e-06 R_Transcript_108453:1-579(+)
GAAAGGAATTCTCTTGGCTCCGAAACAAAAACTGGTCATCACTCATCCAGGGTATTTGAACTTGTAGTTACCGCGACCCTATTCCTCGAAGTGGAAGCCATGGAAGACAGCAACAAGCCACAAACCCTGATGTCCGCCATCATAGCCGTCGATCCCTCCAATGATTTCTCATACATGGTTTGTTCAGTTTGTGAAAAACCCCTTTACTCCCCCAATTTTCGTTGCAAATTCTGCAACCGCAATACCTTGGGTCCCAATTCCTTCGCCACCAAACGCCTCTTCCGCCTCCTTATGTCGATAGCATCAGATACGAAGGTGTTTAGGGTGATATGCTTTGATAGGGCAGCTAAGGTTCTCTTGGGTTGCTCTGCTGATGAGTTCTTCAACTTTGCGAAGCTTCACCCTTTTGCAGCTACAAATGCTGGAAAACTTCTGGAGGGTGAACTGTTTACAATGACATTGTCGAAGCCAAAGAATGGTAATGCTGAACATCTACGTGTTGTATCTATTGTTCCTTTGAGTTCTGGATTTCAGCCAGCAATTCAGTCATTGAAGGAACTCTATCGAGTGGGGTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108453.p1 GENE.R_Transcript_108453~~R_Transcript_108453.p1 ORF type:5prime_partial len:193 (+),score=27.16,Rep_fac-A_C|PF08646.6|2.1e-06 R_Transcript_108453:1-579(+)
ERNSLGSETKTGHHSSRVFELVVTATLFLEVEAMEDSNKPQTLMSAIIAVDPSNDFSYMVCSVCEKPLYSPNFRCKFCNRNTLGPNSFATKRLFRLLMSIASDTKVFRVICFDRAAKVLLGCSADEFFNFAKLHPFAATNAGKLLEGELFTMTLSKPKNGNAEHLRVVSIVPLSSGFQPAIQSLKELYRVGC*

Click here to download the sequence:
Link to NCBI Protein BLAST