Transcript Information: R_Transcript_108461.p2


Annotated TAIR IDAT2G28105.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Replication factor A, C-terminal (InterPro:IPR013955); Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:11976764-11977713 | Forward length=166
E-Value0.0005
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16297286566713
Replicate 20.56240090400798
Replicate 30.61357332846837
Condition 2: 8 Hour
Replicate 10.21862379417183
Replicate 20.19965073072487
Replicate 30.48620385590322
Condition 3: 24 Hour
Replicate 10.81992168670372
Replicate 20.59076586314046
Replicate 31.1725556082266


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108461.p2 GENE.R_Transcript_108461~~R_Transcript_108461.p2 ORF type:5prime_partial len:112 (+),score=3.73 R_Transcript_108461:1-336(+)
GAAAGGAATTCTCTTGGCTCCGAAACAAAAACTGGTCATCACTCATCCAGGGTATTTGAACTTGTAGTTACCGCGACCCTATTCCTCGAAGTGGAAGCCATGGAAGACAACAACAAGCCACAAACCCTAATGTGCGCCATCATAGCCGTCGATACCACCAATGATTTCTCGTACATGGTTTGTTCAGTCTGTGAAAAACCCCTTTATTCCCCCAATTTTCGTTGCAAATTCTGCAACCGCAATACCTTGGGTCCCAATTCCTTCGCCACCAAACGCCTCTTCCGCCTCCTTCTACAAATGCTGGAAAACTTCTGGAGGGTGAACTGTTTACAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108461.p2 GENE.R_Transcript_108461~~R_Transcript_108461.p2 ORF type:5prime_partial len:112 (+),score=3.73 R_Transcript_108461:1-336(+)
ERNSLGSETKTGHHSSRVFELVVTATLFLEVEAMEDNNKPQTLMCAIIAVDTTNDFSYMVCSVCEKPLYSPNFRCKFCNRNTLGPNSFATKRLFRLLLQMLENFWRVNCLQ*

Click here to download the sequence:
Link to NCBI Protein BLAST