Transcript Information: R_Transcript_108469.p1


Annotated TAIR IDAT2G15980.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:6951349-6952845 | Reverse length=498
E-Value1.9E-131
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1387527746165
Replicate 22.0752157388202
Replicate 32.6635741390875
Condition 2: 8 Hour
Replicate 12.3726613320974
Replicate 22.8167777513121
Replicate 33.517753996199
Condition 3: 24 Hour
Replicate 14.7606305685355
Replicate 22.8210214860041
Replicate 33.8600409428443


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108469.p1 GENE.R_Transcript_108469~~R_Transcript_108469.p1 ORF type:complete len:516 (+),score=75.37,PPR_2|PF13041.2|5.6e+02,PPR_2|PF13041.2|75,PPR_2|PF13041.2|9.5e-11,PPR_2|PF13041.2|7.4e-07,PPR_2|PF13041.2|2.4e-13,PPR_2|PF13041.2|1.1e-08,PPR_2|PF13041.2|3.1e-08,PPR_2|PF13041.2|0.022,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|22,PPR_1|PF12854.3|97,PPR_1|PF12854.3|2.5e-05,PPR_1|PF12854.3|2.4e-11,PPR_1|PF12854.3|0.00017,PPR_1|PF12854.3|0.008,PPR_1|PF12854.3|6.6e-05,PPR|PF01535.16|2.2e+02,PPR|PF01535.16|40,PPR|PF01535.16|0.078,PPR|PF01535.16|0.00032,PPR|PF01535.16|6.4e-07,PPR|PF01535.16|5.5e-05,PPR|PF01535.16|6.6e+03,PPR|PF01535.16|0.0086,PPR|PF01535.16|0.019,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|0.0056,PPR_3|PF13812.2|0.0089,PPR_3|PF13812.2|0.066,PPR_3|PF13812.2|0.03,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|0.71 R_Transcript_108469:87-1550(+)
ATGTCATCACCACTCCTCAAACGCGCCGCCTTCATCCCACGCGCCACCACGAAACCCTCCTTCCTCTCATCCTCCACCACCAATTCAGACCAAGACGACACCGTATCAAAAGCCGTAACCGCCCTACTCCACCACCGCTCAAAGTCCCGCTGGTCCACTCTCAAATCCCTCTTCCCAAACGGCTTCACTCCCTCCCAAATTTCCCAAATTCTCCTCCAAATCCGTAACAACCCCCACCTCTCCCATTCCTTCTTCACTTTCGCCCTTCCCAAATCCCCAAAACACCCCTCCTCTTCTCTTCCTACCCTCCATTGCTACGCCACCCTCATCCACATCTTGGGCCGGGCCCGCCTCAAATCCCGGGCCCGATTCCTCATCAAGGAAGCCCTCCGGATCTCCCATCTTGATGATCATGATGATGGGTCCCACCAAAGACCCAAACTTTTTTTTCGTGTATTGGTTGACACTTATAGGGTATGCAATTCTTCACCTGTTGTGTTTGATTTATTTCTTAAGTCCCTCTTAGAACTAAATAAGATAGACCCATGTGTTGAAATTGTGAGATTGTTAATGCCACGTGGCTTTTACCCTCATGGTAAGACTTGTAATGCCTTGGTTTCAGCTGCTTGTAGGAGTAAAGGTTGTTTCTTTGGCTATGATTTGTATAGGGAGTTGTTTAGATTCAATCATGATGATTGTGATAGTCATAGAGATGGTAGAGCATTGCCAAATGTGCATACTTTTAATGAGCTTATGCTCGCGTTTTACCGGGATAGCCAGGTTGATATGGTGGAGGAGCTTTGGATTGAGATGGTTAGGTTGAATTGTACTCCTAAGGTTTGTAGTTATTGTATTTTGATGGCGGCATATTGTGATGAAGGTGAGATGGAGAAGGCTCGAAATGTGTGGGATGAGTTGATATTGCAGGGTTTGAAGCCAGATGTTGTTGCGTATAATACATTGATTGGTGGGTATTGTAGGATTGGGGAGGTTGCCAAGGGCGAGGAGCTTTATAGAGAAATGGGATTGAGCGGATTGGAGGGTACTTGTGTTACTTATCAACATCTTTTGAATGGGTATTGCTTGGTTAGGGATGTTGATTCTGCTATGCTTTTGTATAATGATATGTGTAGGAAAGGGTTTAGTATTGATAGCTCGAGTATTGACTTGATGGTTCGAGTGATTTGTGATGAGAAGTCCGTCTATGCGGCCTTGGGATTCTTTCGGAATGTGATGAGAAATGGGGATTTTGTAGCTAAAGAGACTAGCTATGAGTTTGTCATTAAGGGTTTGTGTGGTGAGGGGGAGTTGGAAGAAGCGTTGAAACTTCAGGCGCAAATGGTAGGGAAGGGGTTGAAACCAAATACTCGTATTTATGATGCTTTCATTGATGGTTTTAAGAAGGATGGAAAGCCTGATGTGGCTGAAAGATTGAGGGAGGAGATGGTGGCAAATCAAACGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108469.p1 GENE.R_Transcript_108469~~R_Transcript_108469.p1 ORF type:complete len:516 (+),score=75.37,PPR_2|PF13041.2|5.6e+02,PPR_2|PF13041.2|75,PPR_2|PF13041.2|9.5e-11,PPR_2|PF13041.2|7.4e-07,PPR_2|PF13041.2|2.4e-13,PPR_2|PF13041.2|1.1e-08,PPR_2|PF13041.2|3.1e-08,PPR_2|PF13041.2|0.022,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|22,PPR_1|PF12854.3|97,PPR_1|PF12854.3|2.5e-05,PPR_1|PF12854.3|2.4e-11,PPR_1|PF12854.3|0.00017,PPR_1|PF12854.3|0.008,PPR_1|PF12854.3|6.6e-05,PPR|PF01535.16|2.2e+02,PPR|PF01535.16|40,PPR|PF01535.16|0.078,PPR|PF01535.16|0.00032,PPR|PF01535.16|6.4e-07,PPR|PF01535.16|5.5e-05,PPR|PF01535.16|6.6e+03,PPR|PF01535.16|0.0086,PPR|PF01535.16|0.019,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|0.0056,PPR_3|PF13812.2|0.0089,PPR_3|PF13812.2|0.066,PPR_3|PF13812.2|0.03,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|0.71 R_Transcript_108469:87-1550(+)
MSSPLLKRAAFIPRATTKPSFLSSSTTNSDQDDTVSKAVTALLHHRSKSRWSTLKSLFPNGFTPSQISQILLQIRNNPHLSHSFFTFALPKSPKHPSSSLPTLHCYATLIHILGRARLKSRARFLIKEALRISHLDDHDDGSHQRPKLFFRVLVDTYRVCNSSPVVFDLFLKSLLELNKIDPCVEIVRLLMPRGFYPHGKTCNALVSAACRSKGCFFGYDLYRELFRFNHDDCDSHRDGRALPNVHTFNELMLAFYRDSQVDMVEELWIEMVRLNCTPKVCSYCILMAAYCDEGEMEKARNVWDELILQGLKPDVVAYNTLIGGYCRIGEVAKGEELYREMGLSGLEGTCVTYQHLLNGYCLVRDVDSAMLLYNDMCRKGFSIDSSSIDLMVRVICDEKSVYAALGFFRNVMRNGDFVAKETSYEFVIKGLCGEGELEEALKLQAQMVGKGLKPNTRIYDAFIDGFKKDGKPDVAERLREEMVANQT*

Click here to download the sequence:
Link to NCBI Protein BLAST