Transcript Information: R_Transcript_108557.p1


Annotated TAIR IDAT3G06840.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49170.1); Has 33 Blast hits to 33 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2156930-2157624 | Forward length=187
E-Value9.5E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9093129037636
Replicate 23.3214486534257
Replicate 36.8590796191869
Condition 2: 8 Hour
Replicate 15.5335288016373
Replicate 23.1583166442353
Replicate 33.7944044799679
Condition 3: 24 Hour
Replicate 18.5605382882964
Replicate 26.4795110864973
Replicate 36.6776048197314


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108557.p1 GENE.R_Transcript_108557~~R_Transcript_108557.p1 ORF type:complete len:177 (+),score=20.25 R_Transcript_108557:261-791(+)
ATGTCAAGCAAATCCCCTGTTTTCCCAATGCTAGAACCTCAACACTTCAGCGATTACGGTTTCGACCCTCAAATCGACCATTTTCAGGTGTTGGAAGAGGCAAGGAAGAACAAGAGGGAAACAACTAGATCAATCGATGCACTCCATTTCAAGCTCCGAAAACCCATCTCCAAAGACGAACTCAAGAAGGGTTCGAAGAAGAAGTGTTGGTGGTGGAAAAACGCCCTCCTCTTCTTCAAGTCCAATTGGGCCGCCCAACACCAACGAGCAAGCCCACTGGACTACCCCAACCACGGTGGTTGTGGATCCATCTCAGGCCCAATTTACTTCACCGAGAGCCTGAGCGGATCCACAACTCCTTACCGGACAGCTAGCAGACCATCATCGGGGCCGCTAGCGGGGACCTTGATGCCATCAAGGAAAGGCGACTTGGAGAATCAGATACCGTACATCAGCCTCAAGGATCTTAACATGGACCAGCAGCATGGGAAAACACCTGCCCCTCCCATGCCCATATATTTTGTTACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108557.p1 GENE.R_Transcript_108557~~R_Transcript_108557.p1 ORF type:complete len:177 (+),score=20.25 R_Transcript_108557:261-791(+)
MSSKSPVFPMLEPQHFSDYGFDPQIDHFQVLEEARKNKRETTRSIDALHFKLRKPISKDELKKGSKKKCWWWKNALLFFKSNWAAQHQRASPLDYPNHGGCGSISGPIYFTESLSGSTTPYRTASRPSSGPLAGTLMPSRKGDLENQIPYISLKDLNMDQQHGKTPAPPMPIYFVT*

Click here to download the sequence:
Link to NCBI Protein BLAST