Transcript Information: R_Transcript_108580.p1


Annotated TAIR IDAT1G79740.1
Annotated Gene NamehAT transposon superfamily
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30004367-30006715 | Reverse length=651
E-Value1.7E-304
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4314413169219
Replicate 22.0565096774257
Replicate 33.0397566478307
Condition 2: 8 Hour
Replicate 13.8682251101493
Replicate 24.133053989603
Replicate 35.3909996787247
Condition 3: 24 Hour
Replicate 13.2641432077304
Replicate 22.6480247641136
Replicate 34.8408825531842


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108580.p1 GENE.R_Transcript_108580~~R_Transcript_108580.p1 ORF type:complete len:633 (+),score=92.54,DUF659|PF04937.11|4.7e-54,Dimer_Tnp_hAT|PF05699.10|2.5e-13,zf-BED|PF02892.11|1.4e-07 R_Transcript_108580:253-2151(+)
ATGGTTCGCGAAAAGGATGTATGTTGGGAGTATGCCGATAAATTAGATGGAAACAAACTGAGATGCAAATTCTGTTCAAGGATTCTAAATGGGGGTATTAGTAGATTGAAGCATCATTTATCTAGACTTCCTAGTAAAGGTGTTAATCCATGTAGCAAAGTGAGAGATGATGTGACTGATAGAGTAAGAGCTATAATTGCAGCCAAGGAAGAAATTAGAGAAACTCCCATCACTACTACTAAGAAGCCAAGACTTATCGAAACTAGTTCACCAGGAGGTAATCCTGCTGGTACTCAACCTGTAATGTGCATCGAAACACCACTTCCTGCTGCTAAATTAACTTTGCCACTGTGTCAAATGAACCCTGTATCCTCGAATGATCAAGAAAAAGCAGAAAGGAGTATCGCTTTGTTCTTCTTTGAGAATAAGCTGGACTTTAGCGTGGCTAGGTCTCCTTCGTACCAGCTGATGATCGAAGCAGTTGGAAAGTGTGGTGCTGGGTTGAACGGCCCCTCGTCAGAAAATCTCAAGACTAAGTGGTTGGAAAAGATCAAGTCTGAAACGAACTTAGGGATGAAGGATATCGAGAAGGAGTGGACTAGAACTGGTTGTACTATCATTGCAGACACTTGGACAGACAACAAATCGAAAGCTCTGATAAATTTTTTGGTTTCTTCACCTTCGAGAACTTTCTTTCACAAGTCAGTGGATGCCTCGTCATATTTCAAGAACATAAAGTGTTTGGCTGACATGTTTAACTCTGTCATTCAGGAGATCGGTCCAGAGAATGTCGTGCAGATAATTGTTGATGGTGCTCTCAGTTATGCTGGTATAGCAAACCATATTCTACAGAACTATCCGCAAATGTTTGTTTCTCCATGTGCTTCACATTGCATAAACTTGATCCTTGAAGAGTTTTGCAAAATTGACTGGGTCAATAGATGTATTATAGAGGCACAAACAATCACGAGATTCATATACAACAATACAGCTCTACTTGAACTAATGAAGAAGTTCACAGGGAGTGTGGATGTGATTAGGACAGGCATAACAAAGTCTGTTTCCAACTTTCTTTCCCTGCAGGCATTGTTTAAGCAAAGACCTAGATTGAAACATATGTTCAGTAGTCCCGAGTATTCAGCTAACTCTGCCTCTGTGAACAAACCACAGAGCATATCTTGTATAACCATTCTGGAGGATAATGAATTCTGGAGAGCAGCCGAAGAATGTATTGCTGTTTCTGAGCCATTTCTGAGGATTCTTAGGGAAGTAGCTGACGGAAAACCTGCAATTGGTTTCATTTATGAGCTAATGATGAAGGCCAAGGAGTCGATAAGAACATATTACATCATGGACGAGAGCAAGTGCAAGACATTTTTAGATATTGTAGACAAGAAGTGGCATAACCAGCTTCATACACCTCTACATTCAGCAGCAGCATTTCTGAATCCGTGCATCCAATATAACCCTGAAGTCAAGTTCATTGCTGCTATCAAAGAAGATTTCTTCAATGTTTTGGAGAAACTGTTGCCTACACCTGAGTTAAGGCGTGACATTACCAGTCAGATTCTTTTGTTTACAAGAGCAAGTGGAATGTTTGGATGCAATTTAGCAAAGGAAGCGCGTGATGCAGTTGCCCCTGGGGAATGGTGGGAGCAATATGGAGATCCAGCACCAGTGTTACAGAAAGTAGCTATCAGAATCCTTAGTCAAGTGTGCAGTACTTCAAGCTTTGAGAAGCAATGGACCACATTCCAACAAATACATTCCGAGAAGAGGAACAAAATTGACAAAGAAGCATTGAATGATCTCGTCTACATAAATTACAACCTTAAATTAGGAGGCCAAAGAACAAGTCTACTGAGGTGGATCCGATACAGCTTGACGACATTGATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108580.p1 GENE.R_Transcript_108580~~R_Transcript_108580.p1 ORF type:complete len:633 (+),score=92.54,DUF659|PF04937.11|4.7e-54,Dimer_Tnp_hAT|PF05699.10|2.5e-13,zf-BED|PF02892.11|1.4e-07 R_Transcript_108580:253-2151(+)
MVREKDVCWEYADKLDGNKLRCKFCSRILNGGISRLKHHLSRLPSKGVNPCSKVRDDVTDRVRAIIAAKEEIRETPITTTKKPRLIETSSPGGNPAGTQPVMCIETPLPAAKLTLPLCQMNPVSSNDQEKAERSIALFFFENKLDFSVARSPSYQLMIEAVGKCGAGLNGPSSENLKTKWLEKIKSETNLGMKDIEKEWTRTGCTIIADTWTDNKSKALINFLVSSPSRTFFHKSVDASSYFKNIKCLADMFNSVIQEIGPENVVQIIVDGALSYAGIANHILQNYPQMFVSPCASHCINLILEEFCKIDWVNRCIIEAQTITRFIYNNTALLELMKKFTGSVDVIRTGITKSVSNFLSLQALFKQRPRLKHMFSSPEYSANSASVNKPQSISCITILEDNEFWRAAEECIAVSEPFLRILREVADGKPAIGFIYELMMKAKESIRTYYIMDESKCKTFLDIVDKKWHNQLHTPLHSAAAFLNPCIQYNPEVKFIAAIKEDFFNVLEKLLPTPELRRDITSQILLFTRASGMFGCNLAKEARDAVAPGEWWEQYGDPAPVLQKVAIRILSQVCSTSSFEKQWTTFQQIHSEKRNKIDKEALNDLVYINYNLKLGGQRTSLLRWIRYSLTTLI*

Click here to download the sequence:
Link to NCBI Protein BLAST