Transcript Information: R_Transcript_108658.p2


Annotated TAIR IDAT5G55970.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22668019-22669312 | Forward length=343
E-Value1.2E-149
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6676071572687
Replicate 25.5129950813744
Replicate 35.4387505465725
Condition 2: 8 Hour
Replicate 16.9080233510384
Replicate 28.8069394961094
Replicate 310.292673061281
Condition 3: 24 Hour
Replicate 16.9899468933512
Replicate 25.4830112884396
Replicate 35.5024955916781


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108658.p2 GENE.R_Transcript_108658~~R_Transcript_108658.p2 ORF type:complete len:358 (+),score=46.70,zf-RING_2|PF13639.2|9.8e-12,zf-RING_11|PF17123.1|6.9e-11 R_Transcript_108658:280-1353(+)
ATGAAACTTGATCAAAATCAAAGTTTTGTCAAGGAGAATAACACTACTACTACTACTACAACTATTCATGTCATTATGATGAACTCGAGTCTCTCGTCGAGTTATTCTTCAATTAACATTAATCAAGACGAAGAAGAAGAAGAGCAGCATGGTATTGTCGAAAGCAATACGAGTAATATTAGATCAGCAAGGACAACCCCAGCTTCATTGTTAATTAGGTTGGCAATGAGGATATCAAGGGCGAAGTGGTTTAATTTCCTTAGAAGGGTTTTTCATTACCAAAATGGGTCAAGATCTCATCTAGGAGCAAACCCTTTTAATTCTGGCAGTTGGATGGTGCTAGAATTTGTAGCACTTGTGGTTCAAATATGCATATCTTTGATCACCCTCTCTGTTTCTAAGGCAGAGAGGCCTGTTTGGCCTATGAGAATATGGGTTATTGGGTATGATTTTGGTTGTGTTATGAGCCTTTTCATCCTTTATTGGAGGTATAAACATTACCATTTGAGGCAAGGAAATGATGGGTTTTCCCTTCCTGATTTGGAACAACAAAGAAGCCATGAAGATTCAAGGAGCGTGCATGTGGTGAACAAATGCAGGGCATCTCTGGACTTATTCTATGCAATGTGGTTTGTGATGGGGAATGTTTGGGTATTCGATTCACGACTGGGATCCTTCACTCGAGCACCAAAGCTTCACATTCTTTGTATCACCATTCTTGCTTGGAATGCCCTTACTTACTCTTTTCCCTTCCTTTTATTTCTTCTTCTTTGCATTTGTGTTCCTTTAGTTAGTAACCTTATTGGCTATAATATGAGCTTGGGTTCTGCTGAAAAAGGGGCTTCTGATGATCAATTATCCCAGTTACGTTGCTGGAGATTTAAGCAACTTGATCTAAGTGTCGAGACTTCTGCCAAGGAAAATCCGGAATGTTGTATATGTCTGGCCAAGTACAAGGACAAGGAAGAGATAAGGCAATTGCCATGTTCTCATATCTTCCACCAAAAATGTGTGGACCAATGGCTCAGGATTATATCCTGTTGCCCCTTATGTAAACAAGGCTTAGATAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108658.p2 GENE.R_Transcript_108658~~R_Transcript_108658.p2 ORF type:complete len:358 (+),score=46.70,zf-RING_2|PF13639.2|9.8e-12,zf-RING_11|PF17123.1|6.9e-11 R_Transcript_108658:280-1353(+)
MKLDQNQSFVKENNTTTTTTTIHVIMMNSSLSSSYSSININQDEEEEEQHGIVESNTSNIRSARTTPASLLIRLAMRISRAKWFNFLRRVFHYQNGSRSHLGANPFNSGSWMVLEFVALVVQICISLITLSVSKAERPVWPMRIWVIGYDFGCVMSLFILYWRYKHYHLRQGNDGFSLPDLEQQRSHEDSRSVHVVNKCRASLDLFYAMWFVMGNVWVFDSRLGSFTRAPKLHILCITILAWNALTYSFPFLLFLLLCICVPLVSNLIGYNMSLGSAEKGASDDQLSQLRCWRFKQLDLSVETSAKENPECCICLAKYKDKEEIRQLPCSHIFHQKCVDQWLRIISCCPLCKQGLDK*

Click here to download the sequence:
Link to NCBI Protein BLAST