Transcript Information: R_Transcript_108709.p1


Annotated TAIR IDAT1G08460.1
Annotated Gene Namehistone deacetylase 8
Annotated Gene Symbol(s)HDA08, HDA8, ATHDA8
Annotation TypeOrtholog
Chromosome Positionchr1:2672527-2674469 | Forward length=377
E-Value9.9E-156
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1741670789585
Replicate 20.42974883893008
Replicate 31.0046814735155
Condition 2: 8 Hour
Replicate 10.85915315604369
Replicate 21.6999500814936
Replicate 30.58382373340426
Condition 3: 24 Hour
Replicate 11.5439461001088
Replicate 21.5477374660054
Replicate 31.5359792762735


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108709.p1 GENE.R_Transcript_108709~~R_Transcript_108709.p1 ORF type:complete len:342 (+),score=62.80,Hist_deacetyl|PF00850.15|1.8e-67 R_Transcript_108709:187-1212(+)
ATGGGGATAGGGTCCGAAACATGGTGTCTATCCTTAAACGGGGCCCCATTTCCAACTTCATTTCCTGGCATCAAGGCAGGCTTGCATCTACTTCTGAGTTGCTCTCCTTTCACTCTCCAGTTCGGGATATATTCCCTAGAGTATGTTGAGGAATTGGAAGAAGCAGATAGAGCTGGAGGAAAGATGATCCGTTGTGGAACTTTTCTAAACCCTGGATCCTGGGAAGCTGCTCTCCTTGCTGCTGGTACTACACTGTCAGCTATGAAGTATATACTAGACGGACATGGTGAAATTGCATATGCGTTAGTCAGACCGCCTGGTCATCACGCTCAGCCCACTCAAGCAGACGGATATTGCTTTCTAAACAATGTTGGTCTGGCAGTTCAATTAGCACTGAGTGAAGGTTGCAATAAAGTTGCTGTTATTGACATTGATGTTCATTATGGGAATGGAACTGCTGAAGGCTTCTACCATTCGAATGAGGTCTTTACTATTTCACTTCATATGAATCATGGTTCTTGGGGACCTTCTCATCCTCAGAGCGGTACCTTTGATGAGCTTGGTGAAGGAGATGGATTTGGTTATAATATGAACATACAATTGCCTAATGGGAGTGGGGATAGTGGTTATGAGTATGCCATGAACGAGCTTGTGGTTCCAGCTGTTCAGAAGTTCGAGTCTAATATGATTGTTCTGGTAGTAGGACAGGACTCCAGTGCTTTTGATCCTAATGGAAGGCAGTGCTTGACAATGGATGGATATAGAGAACTGGCACAGATAATTCGCAGGTTGGTAGATGTGCATTGTAAAGGACAACTTCTGATTGTCCAGGAAGGTGGCTACCACATTACATATGCAGCTTATTGTCTTCACGCGACACTTGAAGGTGCACTGAATGTCTCGAACCCTCTTCTATCTGATCCCATTGCTTACTACCCTGAGGATGAAGCCTTTACTATCAAGGTTATTGATGGCATGAAGCAATATTACAAAACAAATGTTCCATTTCTGAAGGATATTAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108709.p1 GENE.R_Transcript_108709~~R_Transcript_108709.p1 ORF type:complete len:342 (+),score=62.80,Hist_deacetyl|PF00850.15|1.8e-67 R_Transcript_108709:187-1212(+)
MGIGSETWCLSLNGAPFPTSFPGIKAGLHLLLSCSPFTLQFGIYSLEYVEELEEADRAGGKMIRCGTFLNPGSWEAALLAAGTTLSAMKYILDGHGEIAYALVRPPGHHAQPTQADGYCFLNNVGLAVQLALSEGCNKVAVIDIDVHYGNGTAEGFYHSNEVFTISLHMNHGSWGPSHPQSGTFDELGEGDGFGYNMNIQLPNGSGDSGYEYAMNELVVPAVQKFESNMIVLVVGQDSSAFDPNGRQCLTMDGYRELAQIIRRLVDVHCKGQLLIVQEGGYHITYAAYCLHATLEGALNVSNPLLSDPIAYYPEDEAFTIKVIDGMKQYYKTNVPFLKDIN*

Click here to download the sequence:
Link to NCBI Protein BLAST