Transcript Information: R_Transcript_108710.p1


Annotated TAIR IDAT1G08460.1
Annotated Gene Namehistone deacetylase 8
Annotated Gene Symbol(s)HDA08, HDA8, ATHDA8
Annotation TypeOrtholog
Chromosome Positionchr1:2672527-2674469 | Forward length=377
E-Value2.8E-198
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1615348499009
Replicate 20.9393081765186
Replicate 32.3509546480262
Condition 2: 8 Hour
Replicate 11.868658114395
Replicate 21.4711106474464
Replicate 32.388369818472
Condition 3: 24 Hour
Replicate 13.7457474950465
Replicate 22.4376865089585
Replicate 32.1887704686897


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108710.p1 GENE.R_Transcript_108710~~R_Transcript_108710.p1 ORF type:complete len:380 (+),score=73.90,Hist_deacetyl|PF00850.15|3.9e-76 R_Transcript_108710:54-1193(+)
ATGGCAGCTTCAACGGGAGATCGAATTCACGTGTTCTGGGATGAGGGAATGTTGAAGCACGAAACGGGTCGGGGCGTGTTCGATACGGGGTTAGACCCGGGATTCCTAGATGTCCTAGAAAAGCACCCAGAAAATGGGGATAGGGTCCGAAACATGGTGTCTATCCTTAAACGGGGCCCCATTTCCAACTTCATTTCCTGGCATCAAGGCAGGCTTGCATCTACTTCTGAGTTGCTTTCCTTTCACTCTCCAGAGTATGTCGAGGAATTGGAAGAAGCAGATAGAGCTGGAGGAAAGATGATCTGTTGTGGAACTTTTTTAAACCCTGGATCCTGGGAAGCTGCTCTCCTTGCTGCTGGTACTACATTGTCAGCTATGAAGTATATACTGGATGGACATGGTAAAATTGCATATGCTTTAGTCAGACCGCCTGGTCATCACGCTCAGCCCACTCAAGCAGACGGATATTGCTTTCTAAACAATGTTGGTCTGGCAGTTCAATTAGCACTGAGTGAAGGTTGCAATAAAGTTGCTGTTATTGACATTGATGTTCATTATGGGAATGGAACTGCTGAAGGCTTCTACCATTCGAATGAGGTCTTTACTATTTCACTTCATATGAATCATGGTTCTTGGGGACCTTCTCATCCTCAGAGCGGTACCTTTGATGAGCTTGGTGAAGGAGATGGATTTGGTTATAATATGAACATACAATTGCCTAATGGGAGTGGGGATAGTGGTTATGAGTATGCCATGAACGAGCTTGTGGTTCCAGCTGTTCAGAAGTTCGAGTCTAATATGATTGTTCTGGTAGTAGGACAGGACTCCAGTGCTTTTGATCCTAATGGAAGGCAGTGCTTGACAATGGATGGATATAGAGAACTGGCACGGATAGTTCGCAAGTTGGCTGATGTGCATTGTAAAGGACAGCTTCTGATTGTCCAGGAAGGTGGCTACCACATTACATATGCAGCTTATTGTCTTCACGCGACACTTGAAGGTGCACTGAATGTCTCGAACCCTCTTCTATCTGATCCCATTGCTTACTACCCTGAGGATGAAGCCTTTACTATCAAGGTTATTGATGGCATGAAGCAATATTACAAAACAAATGTTCCATTTCTGAAGGATATTAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108710.p1 GENE.R_Transcript_108710~~R_Transcript_108710.p1 ORF type:complete len:380 (+),score=73.90,Hist_deacetyl|PF00850.15|3.9e-76 R_Transcript_108710:54-1193(+)
MAASTGDRIHVFWDEGMLKHETGRGVFDTGLDPGFLDVLEKHPENGDRVRNMVSILKRGPISNFISWHQGRLASTSELLSFHSPEYVEELEEADRAGGKMICCGTFLNPGSWEAALLAAGTTLSAMKYILDGHGKIAYALVRPPGHHAQPTQADGYCFLNNVGLAVQLALSEGCNKVAVIDIDVHYGNGTAEGFYHSNEVFTISLHMNHGSWGPSHPQSGTFDELGEGDGFGYNMNIQLPNGSGDSGYEYAMNELVVPAVQKFESNMIVLVVGQDSSAFDPNGRQCLTMDGYRELARIVRKLADVHCKGQLLIVQEGGYHITYAAYCLHATLEGALNVSNPLLSDPIAYYPEDEAFTIKVIDGMKQYYKTNVPFLKDIN*

Click here to download the sequence:
Link to NCBI Protein BLAST