Transcript Information: R_Transcript_108713.p1


Annotated TAIR IDAT1G08460.1
Annotated Gene Namehistone deacetylase 8
Annotated Gene Symbol(s)HDA08, HDA8, ATHDA8
Annotation TypeOrtholog
Chromosome Positionchr1:2672527-2674469 | Forward length=377
E-Value4E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2854197855436
Replicate 21.4786127053731
Replicate 31.6131505349403
Condition 2: 8 Hour
Replicate 12.0692280237109
Replicate 22.9919489787502
Replicate 32.6843931199164
Condition 3: 24 Hour
Replicate 12.1017710842264
Replicate 22.3297808687229
Replicate 32.0038039502089


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108713.p1 GENE.R_Transcript_108713~~R_Transcript_108713.p1 ORF type:complete len:142 (+),score=24.38,Hist_deacetyl|PF00850.15|3.4e-08 R_Transcript_108713:187-612(+)
ATGGGGATAGGGTCCGAAACATGGTGTCTATCCTTAAACGGGGCCCCATTTCCAACTTCATTTCCTGGCATCAAGGCAGGCTTGCATCTACTTCTGAGTTGCTCTCCTTTCACTCTCCAGTTTGATCCTAATGGAAGGCAGTGCTTGACAATGGATGGATATAGAGAACTGGCACGGATAGTTCGCAAGTTGGCTGATGTGCATTGTAAAGGACAGCTTCTGATTGTCCAGGAAGGTGGCTACCACATTACATATGCAGCTTATTGTCTTCACGCGACACTTGAAGGTGCACTGAATGTCTCGAACCCTCTTCTATCTGATCCCATTGCTTACTACCCTGAGGATGAAGCCTTTACTATCAAGGTTATTGATGGCATGAAGCAATATTACAAAACAAATGTTCCATTTCTGAAGGATATTAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108713.p1 GENE.R_Transcript_108713~~R_Transcript_108713.p1 ORF type:complete len:142 (+),score=24.38,Hist_deacetyl|PF00850.15|3.4e-08 R_Transcript_108713:187-612(+)
MGIGSETWCLSLNGAPFPTSFPGIKAGLHLLLSCSPFTLQFDPNGRQCLTMDGYRELARIVRKLADVHCKGQLLIVQEGGYHITYAAYCLHATLEGALNVSNPLLSDPIAYYPEDEAFTIKVIDGMKQYYKTNVPFLKDIN*

Click here to download the sequence:
Link to NCBI Protein BLAST