Transcript Information: R_Transcript_108775.p1


Annotated TAIR IDAT5G53490.3
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21723488-21724621 | Reverse length=250
E-Value7.7E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31113001627361
Replicate 20
Replicate 30.13015191815996
Condition 2: 8 Hour
Replicate 10.69562116327401
Replicate 20
Replicate 30.82507321001759
Condition 3: 24 Hour
Replicate 10
Replicate 20.62656985484595
Replicate 30.24872391689656


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108775.p1 GENE.R_Transcript_108775~~R_Transcript_108775.p1 ORF type:complete len:176 (+),score=37.08,Pentapeptide|PF00805.18|2.9e+03,Pentapeptide|PF00805.18|1.2e-06 R_Transcript_108775:571-1098(+)
ATGGCGACCCTTGGCATTTCCCTTCACCCAACTGGCATCTCCGTTAGAAACTTGTCACTCAAACGCCTTCATTTCTCAGCTCCTAAATCTACACTCAGGATCTACTGCTCAGCAACTGGAAATGGCAGTGGCAAAGAGAACTCGTCTCAGCTCAAAGAACTTCGGAGCGTGGCATTTGGCCTCCTGGCTACATGGGCCATTACTGCTGCCTCACCTGTAGTAGCTGCTAATCAGAGATTGCCTCCATTGTCAACAGAGCCCAACCGCTGTGAGCGTGCATTTGTTGGTAACACGATTGGTCAAGCGAATGGTGTCTATGACAAGCCTTTAGATCTCCGTCAATGTGACTACACAAATGATAAGTCTAACCTCAAGGGGAAGACTCTTTCAGCCGCTCTCATGTCAGATGCTAAGTTTGATGGTGCAGACATGACAGAAGTGGTCATGTCCAAGGCTTATGCTGTGGGAGCTAGCTTCAAGGGTATGATAATCCTTTTCATTGTTGCCAAATGTTTTGGTCATTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108775.p1 GENE.R_Transcript_108775~~R_Transcript_108775.p1 ORF type:complete len:176 (+),score=37.08,Pentapeptide|PF00805.18|2.9e+03,Pentapeptide|PF00805.18|1.2e-06 R_Transcript_108775:571-1098(+)
MATLGISLHPTGISVRNLSLKRLHFSAPKSTLRIYCSATGNGSGKENSSQLKELRSVAFGLLATWAITAASPVVAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPLDLRQCDYTNDKSNLKGKTLSAALMSDAKFDGADMTEVVMSKAYAVGASFKGMIILFIVAKCFGHL*

Click here to download the sequence:
Link to NCBI Protein BLAST