Transcript Information: R_Transcript_108871.p1


Annotated TAIR IDAT4G20960.1
Annotated Gene NameCytidine/deoxycytidylate deaminase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:11212077-11213530 | Forward length=426
E-Value1E-138
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0098037795263
Replicate 21.9218581616749
Replicate 32.8829990109574
Condition 2: 8 Hour
Replicate 12.6334911956991
Replicate 22.8654676958956
Replicate 33.4890967782895
Condition 3: 24 Hour
Replicate 14.0977321825193
Replicate 22.5234849989219
Replicate 33.3557808101193


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108871.p1 GENE.R_Transcript_108871~~R_Transcript_108871.p1 ORF type:complete len:437 (+),score=108.87,dCMP_cyt_deam_1|PF00383.18|6.5e-21 R_Transcript_108871:310-1620(+)
ATGAATCTCCAAACCCTTTCAATCCCATTTTCTATTCTTCCTCCAAACAGTACCAAAACTGTTTCTATCAAGAATTCAGCTTATGGGTCTCGTAGTTTACCCAAAAGGGTGTTTAATCTACAAAAGAATTGTTGGGTTAATCTGGGAAAACCAGTTTATAATTCAAGATTCAACCTTGGGCCAAGTTTTAGTTTCAGTAAGGGTGGTCATGTTTTGGTTAGGTGTGGAAAATCAGAGAAAGAAGATAACGAGGATGCATTTTACATGAGGAGGTGTGTGGAGCTAGCAAGGCAGGCAATTGGGTGGACTAGTCCTAATCCAATGGTTGGTTGTGTGATTGTCAAGGATGGTAAGGTTGTTGGTGAAGGGTTTCATCCAAAGGCTGGGCAACCCCATGCTGAGGTGTTTGCTTTGAGAAATGCTGGGGAATTAGCTGAGAATGCAACTGCCTATGTGAGCTTGGAACCTTGCAATCATTATGGGAAGACTCCTCCTTGTAGTGAAGCTTTGATCAAAGCCAAAGTCAAGAAAGTTGTAGTTGGCATGGTGGATCCCAACCCCATTGTTTCATCAAGGGGGATTGATAGACTTCGAGAAGCAGGCATTGAAGTTGTCGTTGGAGTCGAGGAAGACTTGTGCAAAAAGCACCTTGAAGCCTTCACCCACAAAATGCTTGCTAAGAAGCCTTTTGTTACCCTTAGATACTCCATCTCTGTTGATGGCGTGCTACTGGACCAATTGGATGAAGAAGCCGTGAAGTGTGGAGGATACTACTCAAAGCTGCTACAAGAGTATGATGCAGTGATTCAAGCTCCTTCTGCAACAACTCAAGAGTTCTTGATCTCGGCATCTCATGAGCCTAATGTTCACCAACCTCTGCACATTTTTATAGCTACAGATTCAGACTTTCCTCTCCAGTTTCATAATTTACCAACAGAAGCAGATTGCAAGGCTGTTGTAATTGCAGATAAAGAAGTGGTTTTAGAACCCAAAGTGTCTCAGATAGGCATTGAGACAGTGATTATGGATCGCATAAGTTTGGATGCTATTCTGGAGTATTGCAATAGACAAGGATTTTGTAATGTTTTGGTTGATTTGAGAGAGAATGCTGATGCTTCAAAAGAGATTCTAGAAGAAGGGCATGAAATGAATTTGATACAAAAGGTTGTGGTCGAGGTGCAGCCTTTTTGGGCTGGTAGCAGAGGAAGTGTTTCCGCCTCAGTTGTGACAAGTCTAACGCAAAGAAAAGGGATGAAGAGTTTGTCATCGAGGAAATCTGGCAAATCCATCTTGCTGGAGGGGTATTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108871.p1 GENE.R_Transcript_108871~~R_Transcript_108871.p1 ORF type:complete len:437 (+),score=108.87,dCMP_cyt_deam_1|PF00383.18|6.5e-21 R_Transcript_108871:310-1620(+)
MNLQTLSIPFSILPPNSTKTVSIKNSAYGSRSLPKRVFNLQKNCWVNLGKPVYNSRFNLGPSFSFSKGGHVLVRCGKSEKEDNEDAFYMRRCVELARQAIGWTSPNPMVGCVIVKDGKVVGEGFHPKAGQPHAEVFALRNAGELAENATAYVSLEPCNHYGKTPPCSEALIKAKVKKVVVGMVDPNPIVSSRGIDRLREAGIEVVVGVEEDLCKKHLEAFTHKMLAKKPFVTLRYSISVDGVLLDQLDEEAVKCGGYYSKLLQEYDAVIQAPSATTQEFLISASHEPNVHQPLHIFIATDSDFPLQFHNLPTEADCKAVVIADKEVVLEPKVSQIGIETVIMDRISLDAILEYCNRQGFCNVLVDLRENADASKEILEEGHEMNLIQKVVVEVQPFWAGSRGSVSASVVTSLTQRKGMKSLSSRKSGKSILLEGYF*

Click here to download the sequence:
Link to NCBI Protein BLAST