Transcript Information: R_Transcript_108907.p1


Annotated TAIR IDAT1G62250.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 30 Blast hits to 30 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22995615-22997003 | Reverse length=267
E-Value2.2E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.2072666163304
Replicate 23.3231554615724
Replicate 36.3446719241142
Condition 2: 8 Hour
Replicate 15.5489550060304
Replicate 26.9978299287164
Replicate 36.6599434650341
Condition 3: 24 Hour
Replicate 13.7161918174341
Replicate 22.3800639090551
Replicate 34.4090340376484


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_108907.p1 GENE.R_Transcript_108907~~R_Transcript_108907.p1 ORF type:complete len:278 (+),score=60.66 R_Transcript_108907:354-1187(+)
ATGCTGATGGTGCATGCTGGGGGAGGTATCGGCAAGTGCCTGAGTTACTTGGACAACCATACGCTTCCAGAGCTTAGTGTTCCCAAGATCACAAATGCTGCTCCACTAGTCAGTGCTGTAAGCTCTCCTGGTCAACCAAGTGTTTCTTGTAGTGAAGGCCTGCGCAAATGCTTTCTTTCCAGGCAAGGCCATGGCCCACTAAAGATTCATTCTCTGTCCCATGACACTGTAACTAAGAGATGGCTGTGTCAGTCCCAAGATCCAATTTCATCAGATGATGAGTACCGCTCATCAACAAATATTGCTATCAGCTTGTTCAAACGATACCGCAATGTGATTGATCGTGGTGGTACTGATAACCTAAAGGAGTTTATCAGAGCTGGAGTAAATGCTTATGCATTAGGCTGTACTGATGAAGGCTTAAGGAAGGAGCTAACCAATATGAAGGAATCAGGAGTTGAAATTGAAGCAATGGAAAACTATGGTGGAAGCACTAGCCTCAAGTTCAAAATATTTTCTCATGAAGTTGATGAATGTATACTTTGGTTGAGCATCGTGTTCATTACCATCTTGTGCACACCGCCACCAACAGTAGTTAGATGGTCTGCTTCCCCACCAGTTTCTGAGGATGTTTTACTCCAGTGGAAGGGCTTTTGTGCTATCATTGCAAATGCATATTATGTGAGAGGAATGGCATGGCTTCCGGTGAAGACTCTGCAATTAGAGCAGATGGCAGTTGTAGGGCAAGCTGAAGAAGCTTCTGTTGTTGCCAGTAGAATGAGATTGGTGTTCAGCACTCTTGAGGTGGTTAGTCCACAATGGCCACGCGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_108907.p1 GENE.R_Transcript_108907~~R_Transcript_108907.p1 ORF type:complete len:278 (+),score=60.66 R_Transcript_108907:354-1187(+)
MLMVHAGGGIGKCLSYLDNHTLPELSVPKITNAAPLVSAVSSPGQPSVSCSEGLRKCFLSRQGHGPLKIHSLSHDTVTKRWLCQSQDPISSDDEYRSSTNIAISLFKRYRNVIDRGGTDNLKEFIRAGVNAYALGCTDEGLRKELTNMKESGVEIEAMENYGGSTSLKFKIFSHEVDECILWLSIVFITILCTPPPTVVRWSASPPVSEDVLLQWKGFCAIIANAYYVRGMAWLPVKTLQLEQMAVVGQAEEASVVASRMRLVFSTLEVVSPQWPRA*

Click here to download the sequence:
Link to NCBI Protein BLAST