Transcript Information: R_Transcript_109009.p1


Annotated TAIR IDAT5G01410.1
Annotated Gene NameAldolase-type TIM barrel family protein
Annotated Gene Symbol(s)PDX1, ATPDX1.3, RSR4, PDX1.3, ATPDX1
Annotation TypeOrtholog
Chromosome Positionchr5:172576-173505 | Reverse length=309
E-Value1.7E-207
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 183.217173426146
Replicate 274.124319361052
Replicate 370.549824417543
Condition 2: 8 Hour
Replicate 193.014994959344
Replicate 2105.0175600848
Replicate 3131.81664837105
Condition 3: 24 Hour
Replicate 196.452129407128
Replicate 286.882217929974
Replicate 394.963268258168


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_109009.p1 GENE.R_Transcript_109009~~R_Transcript_109009.p1 ORF type:complete len:313 (+),score=32.20,SOR_SNZ|PF01680.13|6.4e-112,ThiG|PF05690.10|1,ThiG|PF05690.10|1.1e+03,ThiG|PF05690.10|1.2e-07,Dus|PF01207.13|1.5e+03,Dus|PF01207.13|0.49,Dus|PF01207.13|0.033 R_Transcript_109009:359-1297(+)
ATGTCGGGCAGTGGAGTGGTGACCGTGTACGGCAACGGTGCCATCACGGAGACCTCAACCAACAAAAAATCCCCCTTCTCAGTCAAAGTGGGCCTGGCCCAAATGCTCCGTGGTGGCGTCATCATGGACGTTGTCACCCCCGAACAAGCCCGCATCGCCGAAGAAGCCGGTGCATGTGCCGTCATGGCTCTGGAGCGCGTCCCCGCCGACATCCGCGCTCAAGGGGGTGTCGCTCGTATGTCGGACCCACAACTCATCAAAGACATCAAACGGGCCGTGACCATCCCGGTCATGGCCAAGGCCCGTATTGGCCATTTCGTGGAGGCTCAAATCCTCGAAGCCATCGGAATCGACTACGTGGATGAATCCGAAGTCCTAACCCTTGCTGACGAGGACAACCACATCAACAAGCACAATTTCCAGATCCCTTTTGTCTGTGGCTGTCGTAACCTCGGCGAAGCCCTTCGTCGTATTCGTGAAGGTGCTGCTATGATCCGTACCAAGGGTGAAGCTGGCACTGGCAACATCATCGAGGCTGTCCGTCACGTGAGGTCCGTGATGGGGGAGATTCGTGTTTTAAGAAACATGGATGATGACGAGGTTTTCGCTTACGCTAAGAAGCTGTCGGCCCCGTACGATTTGGTTATGCAGACTAAGCAGCTTGGGAGGCTCCCCGTTGTTCAGTTCGCTGCTGGTGGGGTCGCCACCCCTGCTGACGCCGCACTCATGATGCAATTGGGTTGTGACGGAGTTTTTGTCGGGTCGGGTGTGTTCAAGAGTGGTGACCCGGCTAGGCGGGCCCGTGCTATTGTTCAGGCTGTTACTCATTATAGTGACCCTGATTTGTTGGCTGAGGTTAGCTGTGGCTTGGGTGAGGCCATGGTTGGGATTAATTTGAATGATGAGAAGGTTGAGAGGTACGCCAGTCGCTCCGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_109009.p1 GENE.R_Transcript_109009~~R_Transcript_109009.p1 ORF type:complete len:313 (+),score=32.20,SOR_SNZ|PF01680.13|6.4e-112,ThiG|PF05690.10|1,ThiG|PF05690.10|1.1e+03,ThiG|PF05690.10|1.2e-07,Dus|PF01207.13|1.5e+03,Dus|PF01207.13|0.49,Dus|PF01207.13|0.033 R_Transcript_109009:359-1297(+)
MSGSGVVTVYGNGAITETSTNKKSPFSVKVGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKDIKRAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTLADEDNHINKHNFQIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGEIRVLRNMDDDEVFAYAKKLSAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDLLAEVSCGLGEAMVGINLNDEKVERYASRSE*

Click here to download the sequence:
Link to NCBI Protein BLAST